RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 HSD17B8Q92506 261 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 PEBP4Q96S96 227 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 CABLES2Q9BTV7 478 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 VAMP8Q9BV40 100 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 SEBOXQ9HB31 216 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 LYRM4Q9HD34 91 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 SEPSECSQ9HD40 501 aaKnown RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 GLRX2Q9NS18 164 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 DIMT1Q9UNQ2 313 aaKnown RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 YBX2Q9Y2T7 364 aaKnown RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 C5orf52A6NGY3 159 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 CDRT15L2A8MXV6 281 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SLCO2B1O94956 709 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 IL2RGP31785 369 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 IAH1Q2TAA2 248 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TECRLQ5HYJ1 363 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TXNRD3NBQ6F5E7 133 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 FAM71F2Q6NXP2 309 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TEX261Q6UWH6 196 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 OR2W3Q7Z3T1 314 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 CDC20BQ86Y33 519 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 GABRG1Q8N1C3 465 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 C19orf47Q8N9M1 422 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 HDGFL3Q9Y3E1 203 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 U3KQ87 197 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SERTM2A0A1B0GWG4 89 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 A0A1W2PPC4 97 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ARPC5O15511 151 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 OR5AL1P0C617 328 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 DHRS4L1P0CG22 281 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ADORA3P0DMS8 318 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ACHEP22303 614 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 CLDN2P57739 230 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF674Q2M3X9 581 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 THEM4Q5T1C6 240 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 OR7E24Q6IFN5 339 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 MORN3Q6PF18 240 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SLC23A3Q6PIS1 610 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 CORO6Q6QEF8 472 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ETV3LQ6ZN32 361 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM182Q6ZP80 229 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 BAP18Q8IXM2 172 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 OR52P1PQ8NH57 321 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 OR51Q1Q8NH59 317 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SLC25A46Q96AG3 418 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 MIB2Q96AX9 1013 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF681Q96N22 645 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 GPA33Q99795 319 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ANGPTL4Q9BY76 406 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ZMAT4Q9H898 229 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ERVMER34-1Q9H9K5 563 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 APOBEC3GQ9HC16 384 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF701Q9NV72 531 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 PNPOQ9NVS9 261 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 DUSP13Q9UII6 198 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 RCL1Q9Y2P8 373 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 LOC100289279A0A1B0GTE1 492 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 DCTN6O00399 190 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 MAFKO60675 156 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 CDS2O95674 445 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TMIGD3P0DMS9 266 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF44P15621 663 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 AK4P27144 223 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 PSMB6P28072 239 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 RPS10P46783 165 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 HAAOP46952 286 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 PRDX4Q13162 271 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 KRBOX4Q5JUW0 171 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF678Q5SXM1 525 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 IER5LQ5T953 404 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 GGNBP1Q5YKI7 109 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ASCL5Q7RTU5 278 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SLC25A42Q86VD7 318 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 DNAJC5GQ8N7S2 189 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SCAMP5Q8TAC9 235 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 BAHD1Q8TBE0 780 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 WDR20Q8TBZ3 569 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SECTM1Q8WVN6 248 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 GNB4Q9HAV0 340 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 PIGLQ9Y2B2 252 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 PUS1Q9Y606 427 aaKnown RBP eCLIP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 OTOGLQ3ZCN5 2332 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 HEATR5AQ86XA9 2040 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TNCP24821 2201 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 C5orf67F2Z3F1 127 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SLC25A6P12236 298 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 HOXB1P14653 301 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 BMP5P22003 454 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 C21orf33P30042 268 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 PTH2RP49190 550 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 RPS20P60866 119 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SGCAQ16586 387 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 TSTQ16762 297 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 GSG1Q2KHT4 349 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 SMIM21Q3B7S5 101 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 PCGF3Q3KNV8 242 aa2.98□□□□□ -1.93
CSMD3-202ENST00000339701 CCSAPQ6IQ19 270 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 MRPL54Q6P161 138 aaKnown RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF322Q6U7Q0 402 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-202ENST00000339701 DOK3Q7L591 496 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms