RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ATPIF1Q9UII2 106 aa14.31□□□□□ -0.12
SCARB1-202ENST00000339570 FRG2CA6NGY1 282 aa14.31□□□□□ -0.12
SCARB1-202ENST00000339570 ZNHIT1O43257 154 aa14.31□□□□□ -0.12
SCARB1-202ENST00000339570 SGCEO43556 437 aa14.31□□□□□ -0.12
SCARB1-202ENST00000339570 SNAPINO95295 136 aa14.31□□□□□ -0.12
SCARB1-202ENST00000339570 F2RL1P55085 397 aa14.31□□□□□ -0.12
SCARB1-202ENST00000339570 RIPPLY1Q0D2K3 151 aa14.31□□□□□ -0.12
SCARB1-202ENST00000339570 AVPI1Q5T686 147 aa14.31□□□□□ -0.12
SCARB1-202ENST00000339570 C1QL2Q7Z5L3 287 aa14.31□□□□□ -0.12
SCARB1-202ENST00000339570 PIGTQ969N2 578 aa14.31□□□□□ -0.12
SCARB1-202ENST00000339570 SULT4A1Q9BR01 284 aa14.31□□□□□ -0.12
SCARB1-202ENST00000339570 AMDHD2Q9Y303 409 aa14.31□□□□□ -0.12
SCARB1-202ENST00000339570 RHPN2P1A8MT19 583 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 XRCC2O43543 280 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 SNAPC5O75971 98 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 SCAND1P57086 179 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 IGLV3-21P80748 117 aaPredicted RBP14.3□□□□□ -0.12
SCARB1-202ENST00000339570 FOXF1Q12946 379 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 C14orf28Q4W4Y0 310 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 C20orf196Q8IYI0 205 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 LIPHQ8WWY8 451 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 TAF9BQ9HBM6 251 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 PTGFRP43088 359 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 CLRN1P58418 232 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 FXYD4P59646 89 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 OR2B8PP59922 312 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 TSPO2Q5TGU0 170 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 LRRC18Q8N456 261 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 OR5T2Q8NGG2 359 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 OR2AJ1Q8NGZ0 328 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 TMEM230Q96A57 120 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 CHRDQ9H2X0 955 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 BIN3Q9NQY0 253 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 TEX13DA0A0J9YY54 714 aaPredicted RBP14.3□□□□□ -0.12
SCARB1-202ENST00000339570 LDLRAD4O15165 306 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 DIRAS3O95661 229 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 OR8U9P0C7N5 309 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 SNU13P55769 128 aaKnown RBP14.3□□□□□ -0.12
SCARB1-202ENST00000339570 OR8U1Q8NH10 309 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 REEP6Q96HR9 211 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 CYTL1Q9NRR1 136 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 ZFP57Q9NU63 452 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 KLHL13Q9P2N7 655 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 FLVCR1Q9Y5Y0 555 aa14.3□□□□□ -0.12
SCARB1-202ENST00000339570 MBTPS2O43462 519 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 EIF3GO75821 320 aaKnown RBP eCLIP14.29□□□□□ -0.12
SCARB1-202ENST00000339570 DXOO77932 396 aaKnown RBP14.29□□□□□ -0.12
SCARB1-202ENST00000339570 FBLP22087 321 aaKnown RBP14.29□□□□□ -0.12
SCARB1-202ENST00000339570 BLVRBP30043 206 aaPredicted RBP14.29□□□□□ -0.12
SCARB1-202ENST00000339570 ZNF121P58317 390 aaPredicted RBP14.29□□□□□ -0.12
SCARB1-202ENST00000339570 IAH1Q2TAA2 248 aaPredicted RBP14.29□□□□□ -0.12
SCARB1-202ENST00000339570 Q6ZRG5 221 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 GRINAQ7Z429 371 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 EDAQ92838 391 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 CDC6Q99741 560 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 SLC2A4RGQ9NR83 387 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 RAMP1O60894 148 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 ARG1P05089 322 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 FOLR1P15328 257 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 OPRM1P35372 400 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 GPR85P60893 370 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 HYAL1Q12794 435 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 OR10S1Q8NGN2 331 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 SFT2D1Q8WV19 159 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 DYRK2Q92630 601 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 OR5B2Q96R09 309 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 VN1R1Q9GZP7 353 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 EIF5A2Q9GZV4 153 aaKnown RBP14.29□□□□□ -0.12
SCARB1-202ENST00000339570 LPAR5Q9H1C0 372 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 PCDHGA1Q9Y5H4 931 aa14.29□□□□□ -0.12
SCARB1-202ENST00000339570 TRBV23-1A0A0A0MS06 115 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 ALG1L2C9J202 215 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 RNASEK-C17orf49H0YIS7 233 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 STMND1H3BQB6 276 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 TPPPO94811 219 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 RFC3P40938 356 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 TMEM50BP56557 158 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 SSBP1Q04837 148 aaKnown RBP14.28□□□□□ -0.12
SCARB1-202ENST00000339570 SMCO1Q147U7 214 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 TMEM128Q5BJH2 165 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 FDX2Q6P4F2 183 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 PPP1R3BQ86XI6 285 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 OR1L3Q8NH93 324 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 CD300LFQ8TDQ1 290 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 NRIP2Q9BQI9 281 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 MTIF3Q9H2K0 278 aaKnown RBP14.28□□□□□ -0.12
SCARB1-202ENST00000339570 SHANK1Q9Y566 2161 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 A0A1B0GTQ1 180 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 MEX3AA1L020 520 aaKnown RBP14.28□□□□□ -0.12
SCARB1-202ENST00000339570 HOXC4P09017 264 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-202ENST00000339570 PJVKQ0ZLH3 352 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 THRSPQ92748 146 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 DAZLQ92904 295 aaKnown RBP14.28□□□□□ -0.12
SCARB1-202ENST00000339570 B3GALT1Q9Y5Z6 326 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 NCOA6Q14686 2063 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-202ENST00000339570 TRAV20A0A0B4J274 112 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 RAB19A4D1S5 217 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 G3V3Y1 287 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 MT-ATP6P00846 226 aa14.28□□□□□ -0.12
SCARB1-202ENST00000339570 PRH1P02810 166 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms