RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CBX5P45973 191 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 ZNF133P52736 654 aaPredicted RBP9.54□□□□□ -0.88
RTN3-201ENST00000338850 NAAAQ02083 359 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 ARL6IP1Q15041 203 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 DCAF12L2Q5VW00 463 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 KLHL24Q6TFL4 600 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 TFAP2EQ6VUC0 442 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 MOB3CQ70IA8 216 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 CHMP1BQ7LBR1 199 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 DCXRQ7Z4W1 244 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 LSRQ86X29 649 aaPredicted RBP9.54□□□□□ -0.88
RTN3-201ENST00000338850 GALNT16Q8N428 558 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 ARRDC1Q8N5I2 433 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 APCDD1LQ8NCL9 501 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 NOXO1Q8NFA2 376 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 STEAP2Q8NFT2 490 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 OR1M1Q8NGA1 313 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 OR10H5Q8NGA6 315 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 OR1S1Q8NH92 325 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 STOML3Q8TAV4 291 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.54□□□□□ -0.88
RTN3-201ENST00000338850 FXYD6Q9H0Q3 95 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 CTSFQ9UBX1 484 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 EMC9Q9Y3B6 208 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 PHF3Q92576 2039 aaKnown RBP9.54□□□□□ -0.88
RTN3-201ENST00000338850 DBX1A6NMT0 343 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 MEN1O00255 615 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 SCRG1O75711 98 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 GPANK1O95872 356 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 PLGP00747 810 aaPredicted RBP9.53□□□□□ -0.88
RTN3-201ENST00000338850 RAB3AP20336 220 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 LAP3P28838 519 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 CX3CR1P49238 355 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 RPS18P62269 152 aaKnown RBP9.53□□□□□ -0.88
RTN3-201ENST00000338850 CYCSP99999 105 aaKnown RBP9.53□□□□□ -0.88
RTN3-201ENST00000338850 KLRB1Q12918 225 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 PPA1Q15181 289 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 IGFBP7Q16270 282 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 C2orf68Q2NKX9 166 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 RTL6Q6ICC9 239 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 C11orf87Q6NUJ2 197 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 C11orf88Q6PI97 169 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 ACOT7LQ6ZUV0 252 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 ZNF627Q7L945 461 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 ANKRD37Q7Z713 158 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 CCDC36Q8IYA8 594 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 BEST3Q8N1M1 668 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 SLC38A9Q8NBW4 561 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 OR5D14Q8NGL3 314 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 ELP5Q8TE02 316 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 DUSP19Q8WTR2 217 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 SSC4DQ8WTU2 575 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 ST8SIA2Q92186 375 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 C10orf35Q96D05 121 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 SLAMF6Q96DU3 332 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 CLIP3Q96DZ5 547 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 SCGB3A2Q96PL1 93 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 GPR87Q9BY21 358 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 SLC26A1Q9H2B4 701 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 SERINC1Q9NRX5 453 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 COMMD9Q9P000 198 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 B3GAT1Q9P2W7 334 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 DHCR7Q9UBM7 475 aaKnown RBP9.53□□□□□ -0.88
RTN3-201ENST00000338850 MKL2Q9ULH7 1088 aa9.53□□□□□ -0.88
RTN3-201ENST00000338850 TMA7Q9Y2S6 64 aaKnown RBP9.53□□□□□ -0.88
RTN3-201ENST00000338850 KANTRA0A1W2PQU2 76 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 OR5H14A6NHG9 310 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 DUS4LO95620 317 aaKnown RBP9.52□□□□□ -0.89
RTN3-201ENST00000338850 IGLV3-1P01715 115 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 LYL1P12980 280 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 EIF1P41567 113 aaKnown RBP9.52□□□□□ -0.89
RTN3-201ENST00000338850 GRB2P62993 217 aaKnown RBP9.52□□□□□ -0.89
RTN3-201ENST00000338850 SORDQ00796 357 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 UNC119Q13432 240 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 MELKQ14680 651 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 ETFDHQ16134 617 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 HIST3H3Q16695 136 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 PLPPR5Q32ZL2 321 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 PRAMEF17Q5VTA0 474 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 JMJD6Q6NYC1 403 aaPredicted RBP9.52□□□□□ -0.89
RTN3-201ENST00000338850 C3orf33Q6P1S2 294 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 SLC25A47Q6Q0C1 308 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 FOXL2NBQ6ZUU3 175 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 NAA40Q86UY6 237 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.52□□□□□ -0.89
RTN3-201ENST00000338850 SLC38A6Q8IZM9 456 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 PAQR4Q8N4S7 273 aaPredicted RBP9.52□□□□□ -0.89
RTN3-201ENST00000338850 JAGN1Q8N5M9 183 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 TMEM185AQ8NFB2 350 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 OR4D6Q8NGJ1 314 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 OR51A2Q8NGJ7 313 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 OR6X1Q8NH79 312 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 STT3BQ8TCJ2 826 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 C11orf40Q8WZ69 217 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 MR1Q95460 341 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 ZBTB8AQ96BR9 441 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 PHB2Q99623 299 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 NMES1Q9C002 83 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 OR11A1Q9GZK7 315 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 TINAGL1Q9GZM7 467 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms