RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 FAM206AQ9NX38 181 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 ARHGAP32A7KAX9 2087 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 SLC22A31A6NKX4 558 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 FSTL3O95633 263 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 ANPEPP15144 967 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 HNF1AP20823 631 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 ACKR3P25106 362 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 MDH2P40926 338 aaKnown RBP12.79□□□□□ -0.36
PRKN-201ENST00000338468 OR8B8Q15620 311 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 GFOD2Q3B7J2 385 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 DEGS2Q6QHC5 323 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 KRT77Q7Z794 578 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 WDR86Q86TI4 376 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 SLC35F2Q8IXU6 374 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 SPICQ8N5J4 248 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 UBE2FQ969M7 185 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 ERGIC1Q969X5 290 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 RGCCQ9H4X1 137 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 RHBDD3Q9Y3P4 386 aa12.79□□□□□ -0.36
PRKN-201ENST00000338468 CEACAM18A8MTB9 384 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 MAGEB4O15481 346 aaPredicted RBP12.78□□□□□ -0.36
PRKN-201ENST00000338468 SRSF10O75494 262 aaKnown RBP12.78□□□□□ -0.36
PRKN-201ENST00000338468 WNT2P09544 360 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 CFL1P23528 166 aaKnown RBP12.78□□□□□ -0.36
PRKN-201ENST00000338468 HTR1FP30939 366 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 DCTDP32321 178 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 LCN2P80188 198 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 KCTD18Q6PI47 426 aaPredicted RBP12.78□□□□□ -0.36
PRKN-201ENST00000338468 KLBQ86Z14 1044 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 GID4Q8IVV7 300 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 ZNF679Q8IYX0 411 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 KLHL36Q8N4N3 616 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 CBR4Q8N4T8 237 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 ASB17Q8WXJ9 295 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 PPP1R14AQ96A00 147 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 EME1Q96AY2 570 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 APOL4Q9BPW4 351 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 TMEM246Q9BRR3 403 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 TMPRSS13Q9BYE2 586 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 H2AFY2Q9P0M6 372 aaPredicted RBP12.78□□□□□ -0.36
PRKN-201ENST00000338468 NOP16Q9Y3C1 178 aaKnown RBP12.78□□□□□ -0.36
PRKN-201ENST00000338468 TMEM14AQ9Y6G1 99 aa12.78□□□□□ -0.36
PRKN-201ENST00000338468 PPIAL4EA0A075B759 164 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 ACOD1A6NK06 481 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 LRRC30A6NM36 301 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 ANKRD30BLA7E2S9 258 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 PPIAL4DF5H284 164 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 ZNF254O75437 659 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 PNPP00491 289 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 IGLV3-1P01715 115 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 PPIAL4FP0DN26 164 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 PCMT1P22061 227 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 ALDH3A2P51648 485 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 CXCR4P61073 352 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 MFGE8Q08431 387 aaPredicted RBP12.77□□□□□ -0.37
PRKN-201ENST00000338468 ZIK1Q3SY52 487 aaPredicted RBP12.77□□□□□ -0.37
PRKN-201ENST00000338468 ZNF404Q494X3 552 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 FAHD2BQ6P2I3 314 aaPredicted RBP12.77□□□□□ -0.37
PRKN-201ENST00000338468 ZNF322Q6U7Q0 402 aaPredicted RBP12.77□□□□□ -0.37
PRKN-201ENST00000338468 ZNF826PQ6ZT77 177 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 SSX6Q7RTT6 188 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 C11orf53Q8IXP5 236 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 PQLC1Q8N2U9 271 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 MUC20Q8N307 709 aaPredicted RBP12.77□□□□□ -0.37
PRKN-201ENST00000338468 SPERTQ8NA61 448 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 PLPP7Q8NBV4 271 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 C19orf18Q8NEA5 215 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 OR51G2Q8NGK0 314 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 OR8J1Q8NGP2 316 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 FAHD2AQ96GK7 314 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 HRASLS5Q96KN8 279 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 RAB3IPQ96QF0 476 aaPredicted RBP12.77□□□□□ -0.37
PRKN-201ENST00000338468 MBOAT4Q96T53 435 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 SLC29A1Q99808 456 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 MROQ9BYG7 248 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 FGF23Q9GZV9 251 aaPredicted RBP12.77□□□□□ -0.37
PRKN-201ENST00000338468 FN3KRPQ9HA64 309 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 MMP26Q9NRE1 261 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 CLN6Q9NWW5 311 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 WARS2Q9UGM6 360 aaKnown RBP12.77□□□□□ -0.37
PRKN-201ENST00000338468 MRM2Q9UI43 246 aaKnown RBP12.77□□□□□ -0.37
PRKN-201ENST00000338468 PCDHB10Q9UN67 800 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 POLR3KQ9Y2Y1 108 aaPredicted RBP12.77□□□□□ -0.37
PRKN-201ENST00000338468 PPIAL4AQ9Y536 164 aa12.77□□□□□ -0.37
PRKN-201ENST00000338468 WNK2Q9Y3S1 2297 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 A0A0U1RQV5 110 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 TMEM269A0A1B0GVZ9 245 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 A8MXK9 166 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 TRAPPC2LH3BP13 241 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 APOL3O95236 402 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 GRPP07492 148 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 RIDAP52758 137 aaKnown RBP12.76□□□□□ -0.37
PRKN-201ENST00000338468 SRSF2Q01130 221 aaKnown RBP12.76□□□□□ -0.37
PRKN-201ENST00000338468 KRT74Q7RTS7 529 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 C10orf67Q8IYJ2 551 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 C1orf87Q8N0U7 546 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 CSNK2A3Q8NEV1 391 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 OR11L1Q8NGX0 322 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 FAM81AQ8TBF8 368 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 ITPKCQ96DU7 683 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms