RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 CCL1P22362 96 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 MAP2K3P46734 347 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 EFNA4P52798 201 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 WNT4P56705 351 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 TAS2R43P59537 309 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 GABARAPL2P60520 117 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 RPL22L1Q6P5R6 122 aaKnown RBP13.11□□□□□ -0.31
SEC13-201ENST00000337354 Q6ZSR3 168 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 DOK3Q7L591 496 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 KRT74Q7RTS7 529 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 COMMD2Q86X83 199 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 KLBQ86Z14 1044 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 ZNF485Q8NCK3 441 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 GATAD2BQ8WXI9 593 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 LYZL4Q96KX0 146 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 FOXC2Q99958 501 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 MND1Q9BWT6 205 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 GPR84Q9NQS5 396 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 ERVK-18Q9QC07 812 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 SLC22A13Q9Y226 551 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 MYO9AB2RTY4 2548 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 CCDC168Q8NDH2 2452 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 DHRS7CA6NNS2 312 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 ANKRD30BLA7E2S9 258 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 GMDSO60547 372 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 DHRS3O75911 302 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 TNFSF4P23510 183 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 PTH2RP49190 550 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 ART1P52961 327 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 ATP5J2P56134 94 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 NANOS3P60323 173 aaKnown RBP13.1□□□□□ -0.31
SEC13-201ENST00000337354 RIPPLY1Q0D2K3 151 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 IRF3Q14653 427 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 ZBTB37Q5TC79 503 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 OR5AS1Q8N127 324 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 SPERTQ8NA61 448 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 SEMA6DQ8NFY4 1073 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 OR56B2PQ8NGI1 322 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 CCDC90BQ9GZT6 254 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 MSL2Q9HCI7 577 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 CSMD2Q7Z408 3487 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 DSCAMO60469 2012 aa13.1□□□□□ -0.31
SEC13-201ENST00000337354 TRBV2A0A0J9YWF9 115 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 A0A1B0GTI1 187 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 A0A1B0GVI7 797 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 TMEM212A6NML5 194 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 OR4C45A6NMZ5 311 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 E9PI62 339 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 OGG1O15527 345 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 SYT7O43581 403 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 SPRY3O43610 288 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 IGHV1-46P01743 117 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 CD55P08174 381 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 KIR3DL2P43630 455 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 BDH1Q02338 343 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 ACSM1Q08AH1 577 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 SPHARQ15513 63 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 Q6ZR03 302 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 ZCCHC24Q8N2G6 241 aaKnown RBP13.09□□□□□ -0.31
SEC13-201ENST00000337354 BHLHE23Q8NDY6 225 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 C10orf35Q96D05 121 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 SORCS2Q96PQ0 1159 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 EGLN1Q9GZT9 426 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 COMMD4Q9H0A8 199 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 ABCB9Q9NP78 766 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 DECR2Q9NUI1 292 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 IL19Q9UHD0 177 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 LRCH1Q9Y2L9 728 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 V9GYS6 101 aa13.09□□□□□ -0.31
SEC13-201ENST00000337354 HEATR1Q9H583 2144 aaKnown RBP13.09□□□□□ -0.31
SEC13-201ENST00000337354 ZSCAN5BA6NJL1 495 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 P2RY10O00398 339 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 CST4P01036 141 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 GTF2A1P52655 376 aaPredicted RBP13.08□□□□□ -0.31
SEC13-201ENST00000337354 PRSS12P56730 875 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 MZT1Q08AG7 82 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 TNK1Q13470 666 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 PRSS57Q6UWY2 283 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 ZNF676Q8N7Q3 588 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 OR2Z1Q8NG97 314 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 OR14K1Q8NGZ2 314 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 OR5AK2Q8NH90 309 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 SGCDQ92629 289 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 PERPQ96FX8 193 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 FAM71F1Q96KD3 344 aaPredicted RBP13.08□□□□□ -0.31
SEC13-201ENST00000337354 TPK1Q9H3S4 243 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 MYOZ1Q9NP98 299 aaPredicted RBP13.08□□□□□ -0.31
SEC13-201ENST00000337354 HHLA2Q9UM44 414 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 MPC1Q9Y5U8 109 aa13.08□□□□□ -0.31
SEC13-201ENST00000337354 CSMD1Q96PZ7 3565 aa13.08□□□□□ -0.32
SEC13-201ENST00000337354 ZNF816-ZNF321PA0A0X1KG74 233 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 LILRA1O75019 489 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 ZFPL1O95159 310 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 MT-ND2P03891 347 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 CD1AP06126 327 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 TNFRSF1AP19438 455 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 ACHEP22303 614 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 CA6P23280 308 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 ACKR3P25106 362 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 GNALP38405 381 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms