RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 SOWAHCQ53LP3 525 aaPredicted RBP11.09□□□□□ -0.63
FN1-202ENST00000336916 LIPNQ5VXI9 398 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 RNF165Q6ZSG1 346 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 APH1BQ8WW43 257 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 DDOQ99489 341 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.09□□□□□ -0.63
FN1-202ENST00000336916 MMP11P24347 488 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 SMAGPQ0VAQ4 97 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 TIPARPQ7Z3E1 657 aaKnown RBP11.09□□□□□ -0.63
FN1-202ENST00000336916 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.09□□□□□ -0.63
FN1-202ENST00000336916 ACER3Q9NUN7 267 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 WBP1LQ9NX94 342 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 OR5B21A6NL26 309 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 GCAP28676 217 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 OR2G3Q8NGZ4 309 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 RAB1CQ92928 201 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 FAM122AQ96E09 287 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 ADTRPQ96IZ2 230 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 TMEM165Q9HC07 324 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 TCRBV5S1A1TA0A578 114 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 RELAQ04206 551 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 TRIP6Q15654 476 aaKnown RBP11.09□□□□□ -0.63
FN1-202ENST00000336916 CTRB1P17538 263 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 OPRM1P35372 400 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 GP2P55259 537 aaKnown RBP11.09□□□□□ -0.63
FN1-202ENST00000336916 CTRB2Q6GPI1 263 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 TMEM65Q6PI78 240 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 MKRN2Q9H000 416 aaKnown RBP11.09□□□□□ -0.63
FN1-202ENST00000336916 GALNT9Q9HCQ5 603 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 WSB2Q9NYS7 404 aaPredicted RBP11.09□□□□□ -0.63
FN1-202ENST00000336916 HCSTQ9UBK5 93 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 NRG2O14511 850 aaPredicted RBP11.09□□□□□ -0.63
FN1-202ENST00000336916 FGF2P09038 288 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 PGA3P0DJD8 388 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 NHSL2Q5HYW2 709 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 NUBPLQ8TB37 319 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 PIGTQ969N2 578 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 ZNF251Q9BRH9 671 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 C1RLQ9NZP8 487 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 ZAR1LA6NP61 321 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 GPR37O15354 613 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 EFSO43281 561 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 XRCC3O43542 346 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 SCGB1D1O95968 90 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 TMEM217Q8N7C4 229 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 PRICKLE3O43900 615 aaPredicted RBP11.08□□□□□ -0.64
FN1-202ENST00000336916 CEACAM5P06731 702 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 SRP14P37108 136 aaKnown RBP11.08□□□□□ -0.64
FN1-202ENST00000336916 DRAM2Q6UX65 266 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 SIAH3Q8IW03 269 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 OR5AS1Q8N127 324 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 RRASP10301 218 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 ZNF121P58317 390 aaPredicted RBP11.08□□□□□ -0.64
FN1-202ENST00000336916 HTRA4P83105 476 aaPredicted RBP11.08□□□□□ -0.64
FN1-202ENST00000336916 DNAJC5GQ8N7S2 189 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 PNPLA1Q8N8W4 532 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 PBOV1Q9GZY1 135 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 CDX4O14627 284 aaPredicted RBP11.08□□□□□ -0.64
FN1-202ENST00000336916 LALBAP00709 142 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 APEX1P27695 318 aaKnown RBP11.08□□□□□ -0.64
FN1-202ENST00000336916 GALNSP34059 522 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 SLC17A1Q14916 467 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 RTN4RL1Q86UN2 441 aaPredicted RBP11.08□□□□□ -0.64
FN1-202ENST00000336916 SFT2D1Q8WV19 159 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 ST3GAL6Q9Y274 331 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 GABRG2P18507 467 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 PTGER1P34995 402 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 TIGD3Q6B0B8 471 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 RPL7L1Q6DKI1 246 aaKnown RBP11.08□□□□□ -0.64
FN1-202ENST00000336916 DLEU7Q6UYE1 221 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 GDF2Q9UK05 429 aaPredicted RBP11.08□□□□□ -0.64
FN1-202ENST00000336916 HAAOP46952 286 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 RAB1AP62820 205 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 SORDQ00796 357 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 CLINT1Q14677 625 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 TRMT12Q53H54 448 aaKnown RBP11.08□□□□□ -0.64
FN1-202ENST00000336916 DGAT2L6Q6ZPD8 337 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 ARRDC1Q8N5I2 433 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 TMEM230Q96A57 120 aa11.08□□□□□ -0.64
FN1-202ENST00000336916 M0R296 226 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 SSSCA1O60232 199 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 FGF17O60258 216 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 SHC1P29353 583 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 SSX2Q16385 188 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 PAQR6Q6TCH4 344 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 GAR1Q9NY12 217 aaKnown RBP11.07□□□□□ -0.64
FN1-202ENST00000336916 TAS2R4Q9NYW5 299 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 SERTM1A2A2V5 107 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 OR2A25A4D2G3 310 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 ZFP92A6NM28 416 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 UMAD1C9J7I0 102 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 SNRNP70P08621 437 aaKnown RBP11.07□□□□□ -0.64
FN1-202ENST00000336916 KLF3P57682 345 aaPredicted RBP11.07□□□□□ -0.64
FN1-202ENST00000336916 FOXC1Q12948 553 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 LHX8Q68G74 356 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 OR2W3Q7Z3T1 314 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 ZNF511Q8NB15 262 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 ZNRF4Q8WWF5 429 aa11.07□□□□□ -0.64
FN1-202ENST00000336916 WDR61Q9GZS3 305 aaKnown RBP11.07□□□□□ -0.64
FN1-202ENST00000336916 OIP5O43482 229 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms