RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 NOX4Q9NPH5 578 aa18.48■□□□□ 0.55
TPM1-204ENST00000334895 BATF3Q9NR55 127 aa18.48■□□□□ 0.55
TPM1-204ENST00000334895 SHISA9B4DS77 424 aa18.47■□□□□ 0.55
TPM1-204ENST00000334895 PRSS44E7EML9 344 aa18.47■□□□□ 0.55
TPM1-204ENST00000334895 CASKO14936 926 aa18.47■□□□□ 0.55
TPM1-204ENST00000334895 GATBO75879 557 aaKnown RBP18.47■□□□□ 0.55
TPM1-204ENST00000334895 MPV17P39210 176 aa18.47■□□□□ 0.55
TPM1-204ENST00000334895 SLC22A25Q6T423 547 aa18.47■□□□□ 0.55
TPM1-204ENST00000334895 GDPGP1Q6ZNW5 385 aa18.47■□□□□ 0.55
TPM1-204ENST00000334895 MRPL21Q7Z2W9 205 aaKnown RBP18.47■□□□□ 0.55
TPM1-204ENST00000334895 NUP37Q8NFH4 326 aa18.47■□□□□ 0.55
TPM1-204ENST00000334895 KLF14Q8TD94 323 aaPredicted RBP18.47■□□□□ 0.55
TPM1-204ENST00000334895 TMEM171Q8WVE6 324 aa18.47■□□□□ 0.55
TPM1-204ENST00000334895 SHISA3A0PJX4 238 aa18.46■□□□□ 0.55
TPM1-204ENST00000334895 UCHL1P09936 223 aa18.46■□□□□ 0.55
TPM1-204ENST00000334895 CFL1P23528 166 aaKnown RBP18.46■□□□□ 0.55
TPM1-204ENST00000334895 GLRXP35754 106 aa18.46■□□□□ 0.55
TPM1-204ENST00000334895 VBP1P61758 197 aa18.46■□□□□ 0.55
TPM1-204ENST00000334895 UNQ6126/PRO20091Q6UXV3 157 aa18.46■□□□□ 0.55
TPM1-204ENST00000334895 KBTBD8Q8NFY9 601 aa18.46■□□□□ 0.55
TPM1-204ENST00000334895 ZNF420Q8TAQ5 688 aaPredicted RBP18.46■□□□□ 0.55
TPM1-204ENST00000334895 FAM222BQ8WU58 562 aa18.46■□□□□ 0.55
TPM1-204ENST00000334895 RAB2BQ8WUD1 216 aa18.46■□□□□ 0.55
TPM1-204ENST00000334895 FGGYQ96C11 551 aa18.46■□□□□ 0.55
TPM1-204ENST00000334895 CMBLQ96DG6 245 aa18.46■□□□□ 0.55
TPM1-204ENST00000334895 OPA3Q9H6K4 179 aa18.46■□□□□ 0.55
TPM1-204ENST00000334895 PLEKHB1Q9UF11 243 aaPredicted RBP18.46■□□□□ 0.55
TPM1-204ENST00000334895 SPEF1Q9Y4P9 236 aa18.46■□□□□ 0.55
TPM1-204ENST00000334895 PKDREJQ9NTG1 2253 aa18.46■□□□□ 0.54
TPM1-204ENST00000334895 ANKRD61A6NGH8 418 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 H3BMQ9 156 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 PLAUP00749 431 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 CD3EP07766 207 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 FAHP16930 419 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 MEX3BQ6ZN04 569 aaKnown RBP18.45■□□□□ 0.54
TPM1-204ENST00000334895 CCDC54Q8NEL0 328 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 OR56B2PQ8NGI1 322 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 NDUFA13Q9P0J0 144 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 FZR1Q9UM11 496 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 PIGLQ9Y2B2 252 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 ROS1P08922 2347 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 CCDC160A6NGH7 325 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 DHRS7CA6NNS2 312 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 LILRA1O75019 489 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 MTRF1O75570 445 aaKnown RBP18.45■□□□□ 0.54
TPM1-204ENST00000334895 RAC2P15153 192 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 TUBG1P23258 451 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 COL8A1P27658 744 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 THBS4P35443 961 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 PSG7Q13046 419 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 ALKBH6Q3KRA9 238 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 OR2T2Q6IF00 324 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 RGS7BPQ6MZT1 257 aaPredicted RBP18.45■□□□□ 0.54
TPM1-204ENST00000334895 VHLLQ6RSH7 139 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 C1orf174Q8IYL3 243 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 PARP16Q8N5Y8 322 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 SEMA6DQ8NFY4 1073 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 NEUROG1Q92886 237 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 C12orf43Q96C57 262 aaKnown RBP18.45■□□□□ 0.54
TPM1-204ENST00000334895 PIK3IP1Q96FE7 263 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 TMEM204Q9BSN7 226 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 TUBG2Q9NRH3 451 aa18.45■□□□□ 0.54
TPM1-204ENST00000334895 RSL24D1Q9UHA3 163 aaKnown RBP18.45■□□□□ 0.54
TPM1-204ENST00000334895 TRAV8-7A0A075B6U6 113 aa18.44■□□□□ 0.54
TPM1-204ENST00000334895 CD300LBA8K4G0 201 aa18.44■□□□□ 0.54
TPM1-204ENST00000334895 ZNF12P17014 697 aa18.44■□□□□ 0.54
TPM1-204ENST00000334895 MAPK3P27361 379 aaPredicted RBP18.44■□□□□ 0.54
TPM1-204ENST00000334895 CALRP27797 417 aaKnown RBP18.44■□□□□ 0.54
TPM1-204ENST00000334895 MAP2K3P46734 347 aa18.44■□□□□ 0.54
TPM1-204ENST00000334895 FABP6P51161 128 aa18.44■□□□□ 0.54
TPM1-204ENST00000334895 MBNL2Q5VZF2 373 aaKnown RBP18.44■□□□□ 0.54
TPM1-204ENST00000334895 PHYHIPQ92561 330 aa18.44■□□□□ 0.54
TPM1-204ENST00000334895 HAVCR1Q96D42 359 aa18.44■□□□□ 0.54
TPM1-204ENST00000334895 BCL7BQ9BQE9 202 aa18.44■□□□□ 0.54
TPM1-204ENST00000334895 CA10Q9NS85 328 aa18.44■□□□□ 0.54
TPM1-204ENST00000334895 RNF115Q9Y4L5 304 aa18.44■□□□□ 0.54
TPM1-204ENST00000334895 ATP23Q9Y6H3 246 aa18.44■□□□□ 0.54
TPM1-204ENST00000334895 ABCA4P78363 2273 aa18.43■□□□□ 0.54
TPM1-204ENST00000334895 GGT3PA6NGU5 568 aa18.43■□□□□ 0.54
TPM1-204ENST00000334895 RAF1P04049 648 aa18.43■□□□□ 0.54
TPM1-204ENST00000334895 CD2P06729 351 aa18.43■□□□□ 0.54
TPM1-204ENST00000334895 RIPPLY1Q0D2K3 151 aa18.43■□□□□ 0.54
TPM1-204ENST00000334895 HSD17B12Q53GQ0 312 aa18.43■□□□□ 0.54
TPM1-204ENST00000334895 PAMR1Q6UXH9 720 aa18.43■□□□□ 0.54
TPM1-204ENST00000334895 LRP11Q86VZ4 500 aa18.43■□□□□ 0.54
TPM1-204ENST00000334895 LILRB1Q8NHL6 650 aaPredicted RBP18.43■□□□□ 0.54
TPM1-204ENST00000334895 PPP1R3EQ9H7J1 279 aa18.43■□□□□ 0.54
TPM1-204ENST00000334895 PLEKHA1Q9HB21 404 aa18.43■□□□□ 0.54
TPM1-204ENST00000334895 TAS2R4Q9NYW5 299 aa18.43■□□□□ 0.54
TPM1-204ENST00000334895 HECTD1Q9ULT8 2610 aa18.43■□□□□ 0.54
TPM1-204ENST00000334895 ZNF250P15622 560 aa18.42■□□□□ 0.54
TPM1-204ENST00000334895 IGFBP3P17936 291 aaPredicted RBP18.42■□□□□ 0.54
TPM1-204ENST00000334895 SPCS2Q15005 226 aa18.42■□□□□ 0.54
TPM1-204ENST00000334895 ZNF718Q3SXZ3 478 aa18.42■□□□□ 0.54
TPM1-204ENST00000334895 HIST2H2BCQ6DN03 193 aa18.42■□□□□ 0.54
TPM1-204ENST00000334895 NDNFQ8TB73 568 aa18.42■□□□□ 0.54
TPM1-204ENST00000334895 THRSPQ92748 146 aa18.42■□□□□ 0.54
TPM1-204ENST00000334895 DGCR14Q96DF8 476 aaKnown RBP18.42■□□□□ 0.54
TPM1-204ENST00000334895 KCTD7Q96MP8 289 aa18.42■□□□□ 0.54
TPM1-204ENST00000334895 GSTK1Q9Y2Q3 226 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms