RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CD300LFQ8TDQ1 290 aa12.24□□□□□ -0.45
SYNE3-201ENST00000334258 LIPHQ8WWY8 451 aa12.24□□□□□ -0.45
SYNE3-201ENST00000334258 OR10C1Q96KK4 312 aa12.24□□□□□ -0.45
SYNE3-201ENST00000334258 IP6K3Q96PC2 410 aa12.24□□□□□ -0.45
SYNE3-201ENST00000334258 PTGES2Q9H7Z7 377 aa12.24□□□□□ -0.45
SYNE3-201ENST00000334258 RNF122Q9H9V4 155 aa12.24□□□□□ -0.45
SYNE3-201ENST00000334258 CD207Q9UJ71 328 aa12.24□□□□□ -0.45
SYNE3-201ENST00000334258 KPTNQ9Y664 436 aa12.24□□□□□ -0.45
SYNE3-201ENST00000334258 R4GMQ9 66 aa12.24□□□□□ -0.45
SYNE3-201ENST00000334258 SLC31A2O15432 143 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 UTS2O95399 124 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 MPIG6BO95866 241 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 KNG1P01042 644 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 FSTP19883 344 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 EIF2S3P41091 472 aaKnown RBP12.23□□□□□ -0.45
SYNE3-201ENST00000334258 ROM1Q03395 351 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 ARFRP1Q13795 201 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 C1orf100Q5SVJ3 147 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 ARMC6Q6NXE6 501 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 ANGPTL5Q86XS5 388 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 ELSPBP1Q96BH3 223 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 CCNL2Q96S94 520 aaPredicted RBP12.23□□□□□ -0.45
SYNE3-201ENST00000334258 FLVCR1Q9Y5Y0 555 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 A0A0J9YY10 115 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 TCRBV21S2A2A0A5A6 115 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 CSTBP04080 98 aaKnown RBP12.23□□□□□ -0.45
SYNE3-201ENST00000334258 ARG1P05089 322 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 VSIG8P0DPA2 414 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 GPR3P46089 330 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 SPCS3P61009 180 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 UNC119Q13432 240 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 TOMM34Q15785 309 aaPredicted RBP12.23□□□□□ -0.45
SYNE3-201ENST00000334258 TMEM244Q5VVB8 128 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 HOGA1Q86XE5 327 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 C14orf144Q96I85 54 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 WDR92Q96MX6 357 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 SPACA1Q9HBV2 294 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 RAB18Q9NP72 206 aa12.23□□□□□ -0.45
SYNE3-201ENST00000334258 A0A1B0GV50 99 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 CDC14CA4D256 554 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 FOXS1O43638 330 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 SFT2D2O95562 160 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 H2BFMP0C1H6 154 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 C1orf61Q13536 156 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 NCMAPQ5T1S8 102 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 LCN10Q6JVE6 187 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 C8orf44Q96CB5 159 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 NICN1Q9BSH3 213 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 ST6GALNAC5Q9BVH7 336 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 OR8D2Q9GZM6 311 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 SLC5A7Q9GZV3 580 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 C5orf66Q9H5L9 145 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 PNO1Q9NRX1 252 aaKnown RBP12.22□□□□□ -0.45
SYNE3-201ENST00000334258 CACFD1Q9UGQ2 172 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 TTC28Q96AY4 2481 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 LOC101059948A0A1B0GTJ6 334 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 LOC390937A0A1W2PQ73 354 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 SDCBPO00560 298 aaPredicted RBP12.22□□□□□ -0.45
SYNE3-201ENST00000334258 CD5P06127 495 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 FCGR3AP08637 254 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 PTCRAQ6ISU1 281 aaPredicted RBP12.22□□□□□ -0.45
SYNE3-201ENST00000334258 Q7L0L9 218 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 DTWD2Q8NBA8 298 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 AQP10Q96PS8 301 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 PRODH2Q9UF12 536 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 ASPMQ8IZT6 3477 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 SYT7O43581 403 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 NME2P1O60361 137 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 RAB5AP20339 215 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 RAB2AP61019 212 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 ANKRD55Q3KP44 614 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 SLC22A24Q8N4F4 322 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 AVL9Q8NBF6 648 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 OR5H2Q8NGV7 314 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 RSC1A1Q92681 617 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 PTX4Q96A99 478 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 MRGPRX1Q96LB2 322 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 C2orf50Q96LR7 162 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 CHRDQ9H2X0 955 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 BANF2Q9H503 90 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 METTL1Q9UBP6 276 aaKnown RBP12.22□□□□□ -0.45
SYNE3-201ENST00000334258 CA14Q9ULX7 337 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 AMDHD2Q9Y303 409 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 MEMO1Q9Y316 297 aa12.22□□□□□ -0.45
SYNE3-201ENST00000334258 K7EPK0 472 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 TCAPO15273 167 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 SCGB1D2O95969 90 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 AMY2BP19961 511 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.21□□□□□ -0.45
SYNE3-201ENST00000334258 OR2A2Q6IF42 318 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 FAM71E2Q8N5Q1 922 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 OR10H5Q8NGA6 315 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 RAB3CQ96E17 227 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 MMABQ96EY8 250 aaPredicted RBP12.21□□□□□ -0.45
SYNE3-201ENST00000334258 NXF5Q9H1B4 397 aaKnown RBP12.21□□□□□ -0.45
SYNE3-201ENST00000334258 TCEAL2Q9H3H9 227 aaPredicted RBP12.21□□□□□ -0.45
SYNE3-201ENST00000334258 UNKLQ9H9P5 680 aaKnown RBP12.21□□□□□ -0.45
SYNE3-201ENST00000334258 CYP8B1Q9UNU6 501 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 TRAV36DV7A0A075B6V5 113 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 PRSS47A8MTI9 375 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms