RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 ATPIF1Q9UII2 106 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 DHDHQ9UQ10 334 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 IGSF10Q6WRI0 2623 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 TRGV8A0A0C4DH27 118 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 ANKRD34BA5PLL1 514 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 A8MXE2 369 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 STOMP27105 288 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 OPRM1P35372 400 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 GFOD2Q3B7J2 385 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 WBP1Q96G27 269 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 POM121L2Q96KW2 1035 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 VKORC1Q9BQB6 163 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 COMMD3Q9UBI1 195 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 ZNF629Q9UEG4 869 aaPredicted RBP20.19■□□□□ 0.82
TSEN54-201ENST00000333213 ADGRG4Q8IZF6 3080 aa20.19■□□□□ 0.82
TSEN54-201ENST00000333213 A0A0B4J293 547 aa20.18■□□□□ 0.82
TSEN54-201ENST00000333213 A6NIN4 97 aa20.18■□□□□ 0.82
TSEN54-201ENST00000333213 SYT7O43581 403 aa20.18■□□□□ 0.82
TSEN54-201ENST00000333213 APOC1P02654 83 aa20.18■□□□□ 0.82
TSEN54-201ENST00000333213 RAF1P04049 648 aa20.18■□□□□ 0.82
TSEN54-201ENST00000333213 COX5BP10606 129 aa20.18■□□□□ 0.82
TSEN54-201ENST00000333213 CCL1P22362 96 aa20.18■□□□□ 0.82
TSEN54-201ENST00000333213 MAPK3P27361 379 aaPredicted RBP20.18■□□□□ 0.82
TSEN54-201ENST00000333213 STAC2Q6ZMT1 411 aa20.18■□□□□ 0.82
TSEN54-201ENST00000333213 DPPA2Q7Z7J5 298 aa20.18■□□□□ 0.82
TSEN54-201ENST00000333213 SGK3Q96BR1 496 aa20.18■□□□□ 0.82
TSEN54-201ENST00000333213 KCTD12Q96CX2 325 aaKnown RBP20.18■□□□□ 0.82
TSEN54-201ENST00000333213 RANGRFQ9HD47 186 aaPredicted RBP20.18■□□□□ 0.82
TSEN54-201ENST00000333213 MEMO1Q9Y316 297 aa20.18■□□□□ 0.82
TSEN54-201ENST00000333213 LINC00854A0A1B0GVQ3 168 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 MSTNO14793 375 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 CELA3BP08861 270 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 ADRA2CP18825 462 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 CA7P43166 264 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 PAQR4Q8N4S7 273 aaPredicted RBP20.17■□□□□ 0.82
TSEN54-201ENST00000333213 RELL2Q8NC24 303 aaPredicted RBP20.17■□□□□ 0.82
TSEN54-201ENST00000333213 OR13C3Q8NGS6 347 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 NANOS1Q8WY41 292 aaKnown RBP20.17■□□□□ 0.82
TSEN54-201ENST00000333213 DMRTB1Q96MA1 342 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 MARVELD1Q9BSK0 173 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 ZNF275Q9NSD4 429 aaPredicted RBP20.17■□□□□ 0.82
TSEN54-201ENST00000333213 AK6Q9Y3D8 172 aaKnown RBP20.17■□□□□ 0.82
TSEN54-201ENST00000333213 COL6A6A6NMZ7 2263 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 ARPC4-TTLL3A0A0A6YYG9 625 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 A0A0U1RQV5 110 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 C5orf49A4QMS7 147 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 LYRM1O43325 122 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 HPGDSO60760 199 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 LCATP04180 440 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 ZNF14P17017 642 aaPredicted RBP20.17■□□□□ 0.82
TSEN54-201ENST00000333213 CCNOP22674 350 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 RAB25P57735 213 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 UBE2NP61088 152 aaKnown RBP20.17■□□□□ 0.82
TSEN54-201ENST00000333213 COLCA1Q6ZS62 124 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 TPRA1Q86W33 373 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 PLPP7Q8NBV4 271 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 OR2AE1Q8NHA4 323 aa20.17■□□□□ 0.82
TSEN54-201ENST00000333213 FAM71F1Q96KD3 344 aaPredicted RBP20.17■□□□□ 0.82
TSEN54-201ENST00000333213 SERPINA5P05154 406 aa20.16■□□□□ 0.82
TSEN54-201ENST00000333213 MRPL49Q13405 166 aaKnown RBP20.16■□□□□ 0.82
TSEN54-201ENST00000333213 SLC25A35Q3KQZ1 300 aa20.16■□□□□ 0.82
TSEN54-201ENST00000333213 C6orf183Q5T699 404 aa20.16■□□□□ 0.82
TSEN54-201ENST00000333213 BHLHA15Q7RTS1 189 aaPredicted RBP20.16■□□□□ 0.82
TSEN54-201ENST00000333213 LRRTM1Q86UE6 522 aa20.16■□□□□ 0.82
TSEN54-201ENST00000333213 CCDC36Q8IYA8 594 aa20.16■□□□□ 0.82
TSEN54-201ENST00000333213 OR1J2Q8NGS2 313 aa20.16■□□□□ 0.82
TSEN54-201ENST00000333213 ZFAND1Q8TCF1 268 aa20.16■□□□□ 0.82
TSEN54-201ENST00000333213 ADAT3Q96EY9 351 aaPredicted RBP20.16■□□□□ 0.82
TSEN54-201ENST00000333213 C1QTNF5Q9BXJ0 243 aa20.16■□□□□ 0.82
TSEN54-201ENST00000333213 OSGIN2Q9Y236 505 aa20.16■□□□□ 0.82
TSEN54-201ENST00000333213 PRR14LQ5THK1 2151 aa20.16■□□□□ 0.82
TSEN54-201ENST00000333213 EEF1E1-BLOC1S5C9J1V9 151 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 EEF1E1O43324 174 aaKnown RBP20.15■□□□□ 0.82
TSEN54-201ENST00000333213 HOXB1P14653 301 aaPredicted RBP20.15■□□□□ 0.82
TSEN54-201ENST00000333213 RAB3BP20337 219 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 PLP2Q04941 152 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 TATDN3Q17R31 274 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 COMMD2Q86X83 199 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 OR52H1Q8NGJ2 320 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 FGGYQ96C11 551 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 NBASA2RRP1 2371 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 A0A1B0GVI7 797 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 A8MV72 311 aaPredicted RBP20.15■□□□□ 0.82
TSEN54-201ENST00000333213 ORC5O43913 435 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 AGFG2O95081 481 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 IGFBP3P17936 291 aaPredicted RBP20.15■□□□□ 0.82
TSEN54-201ENST00000333213 FAM27E3Q08E93 113 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 TNK1Q13470 666 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 IL18Q14116 193 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 ST3GAL2Q16842 350 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 OR14K1Q8NGZ2 314 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 C1QTNF6Q9BXI9 259 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 ZCCHC4Q9H5U6 513 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 JKAMPQ9P055 326 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 PCNX1Q96RV3 2341 aa20.15■□□□□ 0.82
TSEN54-201ENST00000333213 ALX3O95076 343 aa20.14■□□□□ 0.81
TSEN54-201ENST00000333213 C1QBP02746 253 aa20.14■□□□□ 0.81
TSEN54-201ENST00000333213 PRSS12P56730 875 aa20.14■□□□□ 0.81
TSEN54-201ENST00000333213 GLYATL3Q5SZD4 288 aa20.14■□□□□ 0.81
TSEN54-201ENST00000333213 HACD4Q5VWC8 232 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms