RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 NKAIN3Q8N8D7 197 aa16.3■□□□□ 0.2
EXOSC3-201ENST00000327304 AKR7LQ8NHP1 331 aa16.3■□□□□ 0.2
EXOSC3-201ENST00000327304 SLC25A38Q96DW6 304 aa16.3■□□□□ 0.2
EXOSC3-201ENST00000327304 OR2H1Q9GZK4 316 aa16.3■□□□□ 0.2
EXOSC3-201ENST00000327304 SLC22A4Q9H015 551 aa16.3■□□□□ 0.2
EXOSC3-201ENST00000327304 WNT5BQ9H1J7 359 aa16.3■□□□□ 0.2
EXOSC3-201ENST00000327304 PLEK2Q9NYT0 353 aa16.3■□□□□ 0.2
EXOSC3-201ENST00000327304 COQ3Q9NZJ6 369 aa16.3■□□□□ 0.2
EXOSC3-201ENST00000327304 ERRFI1Q9UJM3 462 aaPredicted RBP16.3■□□□□ 0.2
EXOSC3-201ENST00000327304 TIMM10BQ9Y5J6 103 aa16.3■□□□□ 0.2
EXOSC3-201ENST00000327304 CTDSPLO15194 276 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 DOK2O60496 412 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 TPPPO94811 219 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 MMP15P51511 669 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 CLDN12P56749 244 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 TAB1Q15750 504 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 WDR31Q8NA23 367 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 OR51E1Q8TCB6 317 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 FOXRED1Q96CU9 486 aaPredicted RBP16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 BOD1Q96IK1 185 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 ABHD1Q96SE0 405 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 RNF121Q9H920 327 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 SLC17A5Q9NRA2 495 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 B3GNT2Q9NY97 397 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 FAM90A27PA6NNH2 459 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 PLA2G10O15496 165 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 SGCEO43556 437 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 PSMB1P20618 241 aaKnown RBP16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 IL32P24001 234 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 DDOSTP39656 456 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 ART1P52961 327 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 GALK2Q01415 458 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 CDSNQ15517 529 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 PABPC1L2AQ5JQF8 200 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 DOK3Q7L591 496 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 SPTSSAQ969W0 71 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 FGGYQ96C11 551 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 HAVCR1Q96D42 359 aa16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 S100A16Q96FQ6 103 aaKnown RBP16.29■□□□□ 0.2
EXOSC3-201ENST00000327304 LOC390937A0A1W2PQ73 354 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 A6NIN4 97 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 IGLV3-1P01715 115 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 SPNP16150 400 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 CCKARP32238 428 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 RFX2P48378 723 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 INPP1P49441 399 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 UBE2NP61088 152 aaKnown RBP16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 RAB11BQ15907 218 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 FAM57BQ71RH2 274 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 NRARPQ7Z6K4 114 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 MDP1Q86V88 176 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 CCDC54Q8NEL0 328 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 OR5D14Q8NGL3 314 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 OR1J2Q8NGS2 313 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 SYNPRQ8TBG9 265 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 RFT1Q96AA3 541 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 THAP7Q9BT49 309 aaPredicted RBP16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 ELOVL5Q9NYP7 299 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 ZNF319Q9P2F9 582 aa16.28■□□□□ 0.2
EXOSC3-201ENST00000327304 A0A0U1RQV5 110 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 SULT1B1O43704 296 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 GSTZ1O43708 216 aaPredicted RBP16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 SYNGR3O43761 229 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 LMX1BO60663 402 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 SLC2A1P11166 492 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 MNDAP41218 407 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 ASCL1P50553 236 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 RAB1AP62820 205 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 RSPO1Q2MKA7 263 aaPredicted RBP16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 ZNF529Q6P280 563 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 TMEM53Q6P2H8 277 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 MTFR2Q6P444 385 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 C17orf78Q8N4C9 275 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 PLPP7Q8NBV4 271 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 CPEB3Q8NE35 698 aaKnown RBP16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 OR6M1Q8NGM8 313 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 LILRB4Q8NHJ6 448 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 C15orf40Q8WUR7 153 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 NANOS1Q8WY41 292 aaKnown RBP16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 SLC7A6Q92536 515 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 TRIM63Q969Q1 353 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 S100PBPQ96BU1 408 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 PGAM5Q96HS1 289 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 GPR84Q9NQS5 396 aa16.27■□□□□ 0.2
EXOSC3-201ENST00000327304 NKX2-6A6NCS4 301 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 OR6C6A6NF89 314 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 OR5H1A6NKK0 313 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 F5H5K5 113 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 M0R135 149 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 CRYGSP22914 178 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 ARR3P36575 388 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 CAPZA1P52907 286 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 GSG1Q2KHT4 349 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 C11orf91Q3C1V1 193 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 MZT2BQ6NZ67 158 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 DRAM2Q6UX65 266 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 Q6ZSR3 168 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 DPPA2Q7Z7J5 298 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 LYPD6Q86Y78 171 aa16.26■□□□□ 0.19
EXOSC3-201ENST00000327304 DTX3Q8N9I9 347 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms