RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 PTPN13Q12923 2485 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 TNRC6AQ8NDV7 1962 aaKnown RBP5.77□□□□□ -1.49
SSH1-202ENST00000326495 OR8B8Q15620 311 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 ZNF534Q76KX8 674 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 ZBTB34Q8NCN2 500 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 FAM71CQ8NEG0 241 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 SRRQ9GZT4 340 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 SLC35B3Q9H1N7 401 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 OBP2BQ9NPH6 170 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 VSX1Q9NZR4 365 aaPredicted RBP5.77□□□□□ -1.49
SSH1-202ENST00000326495 ZAR1LA6NP61 321 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 PTGESO14684 152 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 SSSCA1O60232 199 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 GZMKP49863 264 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 C19orf47Q8N9M1 422 aaKnown RBP5.77□□□□□ -1.49
SSH1-202ENST00000326495 AKR7LQ8NHP1 331 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 NPAS1Q99742 590 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 GLRX2Q9NS18 164 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 LHX3Q9UBR4 397 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 CSPG4Q6UVK1 2322 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 CXorf65A6NEN9 183 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 ANKRD61A6NGH8 418 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 HOXD11P31277 338 aaPredicted RBP5.77□□□□□ -1.49
SSH1-202ENST00000326495 DUSP5Q16690 384 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 JMJD6Q6NYC1 403 aaPredicted RBP5.77□□□□□ -1.49
SSH1-202ENST00000326495 MOB3CQ70IA8 216 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 FAM131CQ96AQ9 280 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 POM121L2Q96KW2 1035 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 COL5A3P25940 1745 aaPredicted RBP5.77□□□□□ -1.49
SSH1-202ENST00000326495 PAPPA2Q9BXP8 1791 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 KCNAB3O43448 404 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 TIMP2P16035 220 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 TNFRSF1AP19438 455 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 CD38P28907 300 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 NPY4RP50391 375 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 SAMD13Q5VXD3 122 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 LYG2Q86SG7 212 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 ADPRHL1Q8NDY3 354 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 MRGPRX1Q96LB2 322 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 OPALINQ96PE5 141 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 APOOQ9BUR5 198 aa5.77□□□□□ -1.49
SSH1-202ENST00000326495 AMMECR1Q9Y4X0 333 aaPredicted RBP5.77□□□□□ -1.49
SSH1-202ENST00000326495 IFITM5A6NNB3 132 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 ZNF724A8MTY0 619 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 K7ERQ8 282 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 ABOP16442 354 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 CNN1P51911 297 aaKnown RBP5.76□□□□□ -1.49
SSH1-202ENST00000326495 RPL27P61353 136 aaKnown RBP5.76□□□□□ -1.49
SSH1-202ENST00000326495 ZNF345Q14585 488 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 SYPL1Q16563 259 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 ZIC5Q96T25 663 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 URGCP-MRPS24S4R325 110 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 GLI3P10071 1580 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 DUS4LO95620 317 aaKnown RBP5.76□□□□□ -1.49
SSH1-202ENST00000326495 CST4P01036 141 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 SOX4Q06945 474 aaPredicted RBP5.76□□□□□ -1.49
SSH1-202ENST00000326495 FFAR4Q5NUL3 377 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 PTX4Q96A99 478 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 SEC22AQ96IW7 307 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 OR5M11Q96RB7 305 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 AHDC1Q5TGY3 1603 aaPredicted RBP5.76□□□□□ -1.49
SSH1-202ENST00000326495 A0A1B0GX78 115 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 CD37P11049 281 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 AREGP15514 252 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 FUT6P51993 359 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 FAM219AQ8IW50 185 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 NPEPL1Q8NDH3 523 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 GLIPR2Q9H4G4 154 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 DYNLRB1Q9NP97 96 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 ADAMTS5Q9UNA0 930 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 RNPS1Q15287 305 aaKnown RBP5.76□□□□□ -1.49
SSH1-202ENST00000326495 SLCO4C1Q6ZQN7 724 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 TMEM229BQ8NBD8 167 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 OR5D13Q8NGL4 314 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 C2orf50Q96LR7 162 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 TMPRSS13Q9BYE2 586 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 LAT2Q9GZY6 243 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 ACER3Q9NUN7 267 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 COL18A1P39060 1754 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 MPDU1O75352 247 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 CTRB1P17538 263 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 VAMP3Q15836 100 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 CTRB2Q6GPI1 263 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 HSD11B1LQ7Z5J1 315 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 ZBTB44Q8NCP5 570 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 GPA33Q99795 319 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 A4GNTQ9UNA3 340 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 TRBV11-1A0A0K0K1C0 115 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 PTBP3O95758 552 aaKnown RBP5.76□□□□□ -1.49
SSH1-202ENST00000326495 CBX7O95931 251 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 MMP9P14780 707 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 CRISP2P16562 243 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 PCSK6P29122 969 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 HNRNPA3P51991 378 aaKnown RBP5.76□□□□□ -1.49
SSH1-202ENST00000326495 PNLIPRP2P54317 469 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 SIGIRRQ6IA17 410 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 RNF175Q8N4F7 328 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 TMEM217Q8N7C4 229 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 WBP2Q969T9 261 aa5.76□□□□□ -1.49
SSH1-202ENST00000326495 MARVELD3Q96A59 401 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms