RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 CALHM3Q86XJ0 350 aa11.02□□□□□ -0.64
FARP1-201ENST00000319562 NEIL1Q96FI4 390 aaPredicted RBP11.02□□□□□ -0.64
FARP1-201ENST00000319562 TMEM56Q96MV1 263 aa11.02□□□□□ -0.64
FARP1-201ENST00000319562 FIZ1Q96SL8 496 aa11.02□□□□□ -0.64
FARP1-201ENST00000319562 TMEM147Q9BVK8 224 aa11.02□□□□□ -0.64
FARP1-201ENST00000319562 MAGT1Q9H0U3 335 aa11.02□□□□□ -0.64
FARP1-201ENST00000319562 FGF21Q9NSA1 209 aa11.02□□□□□ -0.64
FARP1-201ENST00000319562 A6NDN8 102 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 G3V3Y1 287 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 NEURL1O76050 574 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 PTHLHP12272 177 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 ADAT1Q9BUB4 502 aaKnown RBP11.02□□□□□ -0.65
FARP1-201ENST00000319562 EMC6Q9BV81 110 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 MAP1LC3CQ9BXW4 147 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 RNF167Q9H6Y7 350 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 RRP8O43159 456 aaKnown RBP11.02□□□□□ -0.65
FARP1-201ENST00000319562 AKR7A2O43488 359 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 CST4P01036 141 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 FAM87AP0C7U9 286 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 RPL29P47914 159 aaKnown RBP11.02□□□□□ -0.65
FARP1-201ENST00000319562 UBE2MP61081 183 aaKnown RBP11.02□□□□□ -0.65
FARP1-201ENST00000319562 FABP5Q01469 135 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 OR4F17Q8NGA8 305 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 SELENBP1Q13228 472 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 RBM45Q8IUH3 476 aaKnown RBP11.02□□□□□ -0.65
FARP1-201ENST00000319562 ARRDC1Q8N5I2 433 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 ST8SIA1Q92185 356 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 RGPD1P0DJD0 1748 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 IGFBP7Q16270 282 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 BATF2Q8N1L9 274 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.02□□□□□ -0.651e-6■■■□□ 14.7
FARP1-201ENST00000319562 ZDHHC22Q8N966 263 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 DYRK2Q92630 601 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 RDH5Q92781 318 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 SLC46A2Q9BY10 475 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 P4HTMQ9NXG6 502 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 ZNF346Q9UL40 294 aaKnown RBP11.02□□□□□ -0.65
FARP1-201ENST00000319562 DICER1Q9UPY3 1922 aaKnown RBP11.02□□□□□ -0.65
FARP1-201ENST00000319562 PLPP1O14494 284 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 ASTLQ6HA08 431 aaPredicted RBP11.02□□□□□ -0.65
FARP1-201ENST00000319562 ARFGAP1Q8N6T3 406 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 ACY3Q96HD9 319 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 SDF2Q99470 211 aa11.02□□□□□ -0.65
FARP1-201ENST00000319562 VASH2Q86V25 355 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 TMEM99Q8N816 258 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 SLC26A10Q8NG04 563 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 NXPE3Q969Y0 559 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 PELI1Q96FA3 418 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 PBOV1Q9GZY1 135 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 SLC25A19Q9HC21 320 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 PDLIM7Q9NR12 457 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 CICQ96RK0 1608 aaPredicted RBP11.01□□□□□ -0.65
FARP1-201ENST00000319562 TRGV10A0A0A0MS01 117 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 PRSS37A4D1T9 235 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 H3BNC9 293 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 MAVSQ7Z434 540 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 NKAIN4Q8IVV8 208 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 SMIM4Q8WVI0 70 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 WBP2Q969T9 261 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 LAT2Q9GZY6 243 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 FLVCR2Q9UPI3 526 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 M0R1X1 148 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 HOXC11O43248 304 aaPredicted RBP11.01□□□□□ -0.65
FARP1-201ENST00000319562 ZBTB25P24278 435 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 CCL11P51671 97 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 OR52N4Q8NGI2 321 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 IP6K3Q96PC2 410 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 TMED3Q9Y3Q3 217 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 SCN9AQ15858 1988 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 A0A087X0M5 115 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 A0A1B0GX30 115 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 EPHA2P29317 976 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 FUNDC1Q8IVP5 155 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 KCNK15Q9H427 330 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 SCN2AQ99250 2005 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 HMGN4O00479 90 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 GJB3O75712 270 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 CDK5R1Q15078 307 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 DLEU7Q6UYE1 221 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 TMEM40Q8WWA1 233 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 CLDN23Q96B33 292 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 EDEM2Q9BV94 578 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 ELOA3CA0A087WX78 387 aaPredicted RBP11.01□□□□□ -0.65
FARP1-201ENST00000319562 OR2T8A6NH00 312 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 TARM1B6A8C7 271 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 NPPBP16860 134 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 CD200P41217 278 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 FUT6P51993 359 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 NUDCD2Q8WVJ2 157 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 FAM210BQ96KR6 192 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 OXGR1Q96P68 337 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 POMT2Q9UKY4 750 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 FOXJ3Q9UPW0 622 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 PCDHGA9Q9Y5G4 932 aaKnown RBP11.01□□□□□ -0.65
FARP1-201ENST00000319562 HEATR1Q9H583 2144 aaKnown RBP11.01□□□□□ -0.65
FARP1-201ENST00000319562 PRR14Q9BWN1 585 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 HINT3Q9NQE9 182 aaKnown RBP11.01□□□□□ -0.65
FARP1-201ENST00000319562 SLC45A2Q9UMX9 530 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 WSB1Q9Y6I7 421 aa11.01□□□□□ -0.65
FARP1-201ENST00000319562 HRASP01112 189 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms