RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PBOV1Q9GZY1 135 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 LPAR5Q9H1C0 372 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 PDE7BQ9NP56 450 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 MED29Q9NX70 200 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 MMACHCQ9Y4U1 282 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 A6NIZ1 184 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 SOCS1O15524 211 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 LRP3O75074 770 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 SCGNO76038 276 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 SFT2D2O95562 160 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 RCC1P18754 421 aaPredicted RBP11.92□□□□□ -0.5
SKA3-202ENST00000314759 NME2P22392 152 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 ADH6P28332 368 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 ZNF93P35789 620 aaPredicted RBP11.92□□□□□ -0.5
SKA3-202ENST00000314759 SLC6A9P48067 706 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 RAP1BP61224 184 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 DCAF7P61962 342 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 RAP1AP62834 184 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 SUPT4H1P63272 117 aaKnown RBP11.92□□□□□ -0.5
SKA3-202ENST00000314759 ZNF529Q6P280 563 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 PRSS54Q6PEW0 395 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 ZNF101Q8IZC7 436 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 AKR1E2Q96JD6 320 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 WWTR1Q9GZV5 400 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 OR51M1Q9H341 326 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 RAB18Q9NP72 206 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 PLA2G2EQ9NZK7 142 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 FBLN5Q9UBX5 448 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 THADAQ6YHU6 1953 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 C10orf142B7Z368 130 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 NPIPA5E9PKD4 350 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 MBTPS2O43462 519 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 IGHV2-70P01814 119 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 LYL1P12980 280 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 ANKRD55Q3KP44 614 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 DNM1P34Q6PK57 102 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 OR51F2Q8NH61 342 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 ADAMTS17Q8TE56 1095 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 SLAMF6Q96DU3 332 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 OR10C1Q96KK4 312 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 NUDT16L1Q9BRJ7 211 aaKnown RBP11.92□□□□□ -0.5
SKA3-202ENST00000314759 NPIPA1Q9UND3 350 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 NOSIPQ9Y314 301 aaKnown RBP11.92□□□□□ -0.5
SKA3-202ENST00000314759 PCDH15Q96QU1 1955 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 EYSQ5T1H1 3165 aa11.92□□□□□ -0.5
SKA3-202ENST00000314759 CEACAM18A8MTB9 384 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 CD5P06127 495 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 DAOP14920 347 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 BCKDHBP21953 392 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 OR10S1Q8NGN2 331 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 SMIM8Q96KF7 97 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 AQP10Q96PS8 301 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 RPS10P5Q9NQ39 176 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 CUTCQ9NTM9 273 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 FLVCR1Q9Y5Y0 555 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 A6NLC8 198 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 MED6O75586 246 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 RAD51DO75771 328 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 FCGR3AP08637 254 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 TMEM50BP56557 158 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 FOXK1P85037 733 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 POU3F1Q03052 451 aaPredicted RBP11.91□□□□□ -0.5
SKA3-202ENST00000314759 VAX1Q5SQQ9 334 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 GLIPR1L1Q6UWM5 242 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 PRSS58Q8IYP2 241 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 C15orf54Q8N8G6 183 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 C11orf40Q8WZ69 217 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 SULT4A1Q9BR01 284 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 RTBDNQ9BSG5 229 aaPredicted RBP11.91□□□□□ -0.5
SKA3-202ENST00000314759 SLC5A7Q9GZV3 580 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 CACFD1Q9UGQ2 172 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 ANAPC10Q9UM13 185 aa11.91□□□□□ -0.5
SKA3-202ENST00000314759 FAM157AC9JC47 383 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 ADAM10O14672 748 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 CLN5O75503 358 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 MPIG6BO95866 241 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 CHRM2P08172 466 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 NQO2P16083 231 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 AGAP20933 346 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 RAB32Q13637 225 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 RPL7L1Q6DKI1 246 aaKnown RBP11.9□□□□□ -0.5
SKA3-202ENST00000314759 KLHL24Q6TFL4 600 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 ARRDC1Q8N5I2 433 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 OR51E1Q8TCB6 317 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 SECTM1Q8WVN6 248 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 RAB3CQ96E17 227 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 TMEM41AQ96HV5 264 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 C1orf147Q96MC9 270 aaPredicted RBP11.9□□□□□ -0.5
SKA3-202ENST00000314759 SOX7Q9BT81 388 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 BANF2Q9H503 90 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 GPR27Q9NS67 375 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 ATXN7L1Q9ULK2 861 aaPredicted RBP11.9□□□□□ -0.5
SKA3-202ENST00000314759 PHF3Q92576 2039 aaKnown RBP11.9□□□□□ -0.5
SKA3-202ENST00000314759 A0A1W2PP11 408 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 C2orf72A6NCS6 295 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 DAP3P51398 398 aaKnown RBP11.9□□□□□ -0.5
SKA3-202ENST00000314759 MRPS21P82921 87 aaKnown RBP11.9□□□□□ -0.5
SKA3-202ENST00000314759 ZP4Q12836 540 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 TSC22D1Q15714 1073 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 NSDHLQ15738 373 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms