RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 RANGRFQ9HD47 186 aaPredicted RBP12.15□□□□□ -0.46
DDX54-202ENST00000314045 ROS1P08922 2347 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 HS3ST1O14792 307 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 MGMTP16455 207 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 IL11P20809 199 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 UQCRC1P31930 480 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 DDOSTP39656 456 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 DPPA2Q7Z7J5 298 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 LSRQ86X29 649 aaPredicted RBP12.14□□□□□ -0.47
DDX54-202ENST00000314045 TMEM251Q8N6I4 163 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 MFFQ9GZY8 342 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 ATP23Q9Y6H3 246 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 NPIPB9F8W1W9 429 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 CAV2P51636 162 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 RRAS2P62070 204 aaPredicted RBP12.14□□□□□ -0.47
DDX54-202ENST00000314045 CREB3L2Q70SY1 520 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 PRSS35Q8N3Z0 413 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 ACSM4P0C7M7 580 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 OPRM1P35372 400 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 NPY4RP50391 375 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 EDDM3BP56851 147 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 OR8B8Q15620 311 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 SLC26A10Q8NG04 563 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 SCGB1C1Q8TD33 95 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 DEDD2Q8WXF8 326 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 ZNF275Q9NSD4 429 aaPredicted RBP12.14□□□□□ -0.47
DDX54-202ENST00000314045 DECR2Q9NUI1 292 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 RYDENQ9NUL5 291 aaKnown RBP12.14□□□□□ -0.47
DDX54-202ENST00000314045 B3GNT2Q9NY97 397 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 GHRLQ9UBU3 117 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 NEUROG3Q9Y4Z2 214 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 OR4C45A6NMZ5 311 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 ACTL6BO94805 426 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 RAP2BP61225 183 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 EDDM3AQ14507 147 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 EGLN1Q9GZT9 426 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 FRRS1LQ9P0K9 344 aa12.14□□□□□ -0.47
DDX54-202ENST00000314045 LOC101059948A0A1B0GTJ6 334 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 ZP4Q12836 540 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 FCN2Q15485 313 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 ZNF709Q8N972 641 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 NDRG3Q9UGV2 375 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 ZNF732B4DXR9 585 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 DCTN6O00399 190 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 DHRS3O75911 302 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 ZNF728P0DKX0 622 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 FUT6P51993 359 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 ATP1A1-AS1Q5TC04 95 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 BTLAQ7Z6A9 289 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 OR56B2PQ8NGI1 322 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 DCUN1D4Q92564 292 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 SPSB1Q96BD6 273 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 AUNIPQ9H7T9 357 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 IGKV1D-42A0A075B6H8 117 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 IGLV3-12A0A075B6K2 115 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 CDCP2Q5VXM1 449 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 GABRG1Q8N1C3 465 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 OR1S1Q8NH92 325 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 SEC22AQ96IW7 307 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 SEC22CQ9BRL7 303 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 ZNF391Q9UJN7 358 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 ST3GAL6Q9Y274 331 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 PLXNA4Q9HCM2 1894 aa12.13□□□□□ -0.47
DDX54-202ENST00000314045 FAM221AA4D161 298 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 EFSO43281 561 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 XRCC3O43542 346 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 CCL2P13500 99 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 MRPL14Q6P1L8 145 aaKnown RBP12.12□□□□□ -0.47
DDX54-202ENST00000314045 GPX7Q96SL4 187 aaPredicted RBP12.12□□□□□ -0.47
DDX54-202ENST00000314045 C20orf85Q9H1P6 137 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 KLK11Q9UBX7 282 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 UBQLN2Q9UHD9 624 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 ZNF318Q5VUA4 2279 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 DOCK9Q9BZ29 2069 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 I3L521 148 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 IFNA5P01569 189 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 GABRA1P14867 456 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 GNB3P16520 340 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 ACSM1Q08AH1 577 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 DEFB108BQ8NET1 73 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 SMIM4Q8WVI0 70 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 MDC1Q14676 2089 aaKnown RBP12.12□□□□□ -0.47
DDX54-202ENST00000314045 KIR2DS1A0A191URI9 304 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 PRR19A6NJB7 356 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 TXNDC12O95881 172 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 THY1P04216 161 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 KIR2DS4P43632 304 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 ERVK-16P61578 105 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 KIR2DS1Q14954 304 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 KISS1Q15726 138 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 OR2T2Q6IF00 324 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 SLC30A7Q8NEW0 376 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 PLEKHB1Q9UF11 243 aaPredicted RBP12.12□□□□□ -0.47
DDX54-202ENST00000314045 COL6A6A6NMZ7 2263 aa12.12□□□□□ -0.47
DDX54-202ENST00000314045 LRRC30A6NM36 301 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 CD300LBA8K4G0 201 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 H7C1Q1 480 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 SPRY1O43609 319 aaPredicted RBP12.11□□□□□ -0.47
DDX54-202ENST00000314045 GFRA3O60609 400 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms