RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 ZNF826PQ6ZT77 177 aa13.64□□□□□ -0.23
LSM1-201ENST00000311351 BOLLQ8N9W6 283 aaKnown RBP13.64□□□□□ -0.23
LSM1-201ENST00000311351 ERGIC1Q969X5 290 aa13.64□□□□□ -0.23
LSM1-201ENST00000311351 DUS3LQ96G46 650 aaKnown RBP13.64□□□□□ -0.23
LSM1-201ENST00000311351 SSBP3Q9BWW4 388 aaPredicted RBP13.64□□□□□ -0.23
LSM1-201ENST00000311351 OR10A2Q9H208 303 aa13.64□□□□□ -0.23
LSM1-201ENST00000311351 SEMA6AQ9H2E6 1030 aa13.64□□□□□ -0.23
LSM1-201ENST00000311351 FN3KRPQ9HA64 309 aa13.64□□□□□ -0.23
LSM1-201ENST00000311351 OR5V1Q9UGF6 321 aa13.64□□□□□ -0.23
LSM1-201ENST00000311351 LRCH1Q9Y2L9 728 aa13.64□□□□□ -0.23
LSM1-201ENST00000311351 POLR3KQ9Y2Y1 108 aaPredicted RBP13.64□□□□□ -0.23
LSM1-201ENST00000311351 LRP12Q9Y561 859 aa13.64□□□□□ -0.23
LSM1-201ENST00000311351 A6NLC8 198 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 ANKRD30BLA7E2S9 258 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 PSMD9O00233 223 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 FSHBP01225 129 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 GRPP07492 148 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 ZNF12P17014 697 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 ALOX5APP20292 161 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 GSK3AP49840 483 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 PSMA6P60900 246 aaKnown RBP13.63□□□□□ -0.23
LSM1-201ENST00000311351 ESRRGP62508 458 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 KDM4DQ6B0I6 523 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 RHOUQ7L0Q8 258 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 WDR86Q86TI4 376 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.63□□□□□ -0.23
LSM1-201ENST00000311351 TEX29Q8N6K0 151 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 SEMA6DQ8NFY4 1073 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 OR52H1Q8NGJ2 320 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 NANPQ8TBE9 248 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 NEIL1Q96FI4 390 aaPredicted RBP13.63□□□□□ -0.23
LSM1-201ENST00000311351 SP140LQ9H930 580 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 C1orf123Q9NWV4 160 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 RNF7Q9UBF6 113 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 LAMP5Q9UJQ1 280 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 COPS3Q9UNS2 423 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 INSIG2Q9Y5U4 225 aa13.63□□□□□ -0.23
LSM1-201ENST00000311351 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.62□□□□□ -0.23
LSM1-201ENST00000311351 ZAR1LA6NP61 321 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 FCGR1AP12314 374 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 DDOSTP39656 456 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 PITPNBP48739 271 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 GNB2P62879 340 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 ZNF154Q13106 437 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 LCN1P1Q5VSP4 162 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 SLX4IPQ5VYV7 408 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 SFRP4Q6FHJ7 346 aaPredicted RBP13.62□□□□□ -0.23
LSM1-201ENST00000311351 ASRGL1Q7L266 308 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 KRT77Q7Z794 578 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 ZDHHC13Q8IUH4 622 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 TCEANCQ8N8B7 351 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 OR8B12Q8NGG6 310 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 OR8B3Q8NGG8 313 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 OR8S1Q8NH09 359 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 C22orf15Q8WYQ4 148 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 OR8B2Q96RD0 313 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 TEAD3Q99594 435 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 CIB1Q99828 191 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 SLC6A7Q99884 636 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 PAPOLGQ9BWT3 736 aaKnown RBP13.62□□□□□ -0.23
LSM1-201ENST00000311351 YIPF3Q9GZM5 350 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 MIOXQ9UGB7 285 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 RHBDD3Q9Y3P4 386 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 ANK2Q01484 3957 aa13.62□□□□□ -0.23
LSM1-201ENST00000311351 hCG_1807616A0A1W2PRN6 198 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 SAC3D1A6NKF1 404 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 C3orf80F5H4A9 247 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 FSTL3O95633 263 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 EGR1P18146 543 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 CFL1P23528 166 aaKnown RBP13.61□□□□□ -0.23
LSM1-201ENST00000311351 ACKR3P25106 362 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 CSNK2BP67870 215 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 PAX2Q02962 417 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 SCGB2A2Q13296 93 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 OR8B8Q15620 311 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 ARMCX4Q5H9R4 360 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 C12orf73Q69YU5 71 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 DCDC5Q6ZRR9 648 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 SPERTQ8NA61 448 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 PYDC1Q8WXC3 89 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 LYZL4Q96KX0 146 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 CNN2Q99439 309 aaKnown RBP13.61□□□□□ -0.23
LSM1-201ENST00000311351 PRRG3Q9BZD7 231 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 C14orf119Q9NWQ9 140 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 CTSZQ9UBR2 303 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 OAZ3Q9UMX2 235 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 AUP1Q9Y679 476 aa13.61□□□□□ -0.23
LSM1-201ENST00000311351 LGALS8O00214 317 aa13.6□□□□□ -0.23
LSM1-201ENST00000311351 KLF17Q5JT82 389 aaPredicted RBP13.6□□□□□ -0.23
LSM1-201ENST00000311351 NLRC3Q7RTR2 1065 aa13.6□□□□□ -0.23
LSM1-201ENST00000311351 GCSAMQ8N6F7 178 aa13.6□□□□□ -0.23
LSM1-201ENST00000311351 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.6□□□□□ -0.23
LSM1-201ENST00000311351 PLPP7Q8NBV4 271 aa13.6□□□□□ -0.23
LSM1-201ENST00000311351 TMEM163Q8TC26 289 aa13.6□□□□□ -0.23
LSM1-201ENST00000311351 ZNF418Q8TF45 676 aaPredicted RBP13.6□□□□□ -0.23
LSM1-201ENST00000311351 IL4I1Q96RQ9 567 aa13.6□□□□□ -0.23
LSM1-201ENST00000311351 MRI1Q9BV20 369 aa13.6□□□□□ -0.23
LSM1-201ENST00000311351 RGCCQ9H4X1 137 aa13.6□□□□□ -0.23
LSM1-201ENST00000311351 NIPAL2Q9H841 368 aa13.6□□□□□ -0.23
LSM1-201ENST00000311351 IGHV3OR15-7A0A075B7D8 119 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms