RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 FAM74A1Q5RGS3 127 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 NAA40Q86UY6 237 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 DTX1Q86Y01 620 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 GTPBP8Q8N3Z3 284 aaPredicted RBP13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 KCNG3Q8TAE7 436 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 FBXW5Q969U6 566 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 RAB3CQ96E17 227 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 TMEM41AQ96HV5 264 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 ZNF75AQ96N20 296 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 PHB2Q99623 299 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 TMEM59Q9BXS4 323 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 SLC25A32Q9H2D1 315 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 PPA2Q9H2U2 334 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 EML6Q6ZMW3 1958 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 FAM25EA8MYX2 175 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 D6RAR5 112 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 MFNGO00587 321 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 IGLV3-1P01715 115 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 UMODP07911 640 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 CYC1P08574 325 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 FGF5P12034 268 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 VAMP1P23763 118 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 CTSSP25774 331 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 ENDOGQ14249 297 aaKnown RBP13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 BEX5Q5H9J7 111 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 KCTD9Q7L273 389 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 TMEM54Q969K7 222 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 MS4A7Q9GZW8 240 aaPredicted RBP13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 SHARPINQ9H0F6 387 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 WDR54Q9H977 334 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 PROK2Q9HC23 129 aa13.4□□□□□ -0.26
SPIRE1-201ENST00000309836 TNRC6BQ9UPQ9 1833 aaKnown RBP13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 MED12Q93074 2177 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 A0A087WZY1 265 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 KANTRA0A1W2PQU2 76 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 DBX1A6NMT0 343 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 KRBOX1C9JBD0 128 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 DUS4LO95620 317 aaKnown RBP13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 LUMP51884 338 aaPredicted RBP13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 H3F3AP84243 136 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 DMRTC1Q5HYR2 192 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 VAX1Q5SQQ9 334 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 FOXL2NBQ6ZUU3 175 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 ACOT7LQ6ZUV0 252 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 STPG2Q8N412 459 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 EIF4E3Q8N5X7 224 aaKnown RBP13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 PXT1Q8NFP0 134 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 MRPS24Q96EL2 167 aaKnown RBP13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 PGAM5Q96HS1 289 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 ARHGAP5-AS1Q96IT6 56 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 GAREM1Q9H706 876 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 SPEGQ15772 3267 aa13.39□□□□□ -0.27
SPIRE1-201ENST00000309836 IGHV1-45A0A0A0MS14 117 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 IGHV3-15A0A0B4J1V0 119 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 OR5H15A6NDH6 313 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 EEF1E1-BLOC1S5C9J1V9 151 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 TLX3O43711 291 aaPredicted RBP13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 CRTAPO75718 401 aaPredicted RBP13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 CCL3P10147 92 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 PRF1P14222 555 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 MSR1P21757 451 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 FKBP2P26885 142 aaKnown RBP13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 CSNK1A1P48729 337 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 LSM6P62312 80 aaKnown RBP13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 C10orf128Q5T292 105 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 PXDC1Q5TGL8 231 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 C1QL2Q7Z5L3 287 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 IFI44Q8TCB0 444 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 HLA-CQ95604 372 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 TMEM230Q96A57 120 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 NABP1Q96AH0 204 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 NTNG2Q96CW9 530 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 IMMP1LQ96LU5 166 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 GPER1Q99527 375 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 BARX1Q9HBU1 254 aaPredicted RBP13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 MBD2Q9UBB5 411 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 VCANP13611 3396 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 FOXI3A8MTJ6 420 aaPredicted RBP13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 G3V3Y1 287 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 COX6A1P12074 109 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 TAS2R31P59538 309 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 PNLIPRP3Q17RR3 467 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 RSPO1Q2MKA7 263 aaPredicted RBP13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 MOB3CQ70IA8 216 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 OR56B1Q8NGI3 324 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 TERB2Q8NHR7 220 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 ZNF385AQ96PM9 386 aaKnown RBP13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 UCN2Q96RP3 112 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 OCSTAMPQ9BR26 566 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 ANGPTL4Q9BY76 406 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 ZNF700Q9H0M5 742 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 PILRBQ9UKJ0 227 aa13.38□□□□□ -0.27
SPIRE1-201ENST00000309836 WDPCPO95876 746 aa13.37□□□□□ -0.27
SPIRE1-201ENST00000309836 CD63P08962 238 aa13.37□□□□□ -0.27
SPIRE1-201ENST00000309836 LIFP15018 202 aa13.37□□□□□ -0.27
SPIRE1-201ENST00000309836 SERPINF1P36955 418 aa13.37□□□□□ -0.27
SPIRE1-201ENST00000309836 NPY4RP50391 375 aa13.37□□□□□ -0.27
SPIRE1-201ENST00000309836 ZNF133P52736 654 aaPredicted RBP13.37□□□□□ -0.27
SPIRE1-201ENST00000309836 HIST1H3AP68431 136 aa13.37□□□□□ -0.27
SPIRE1-201ENST00000309836 EIF3IQ13347 325 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms