RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SLC30A2Q9BRI3 323 aa15.28■□□□□ 0.04
SSSCA1-201ENST00000309328 GPR84Q9NQS5 396 aa15.28■□□□□ 0.04
SSSCA1-201ENST00000309328 BABAM2Q9NXR7 383 aa15.28■□□□□ 0.04
SSSCA1-201ENST00000309328 CACNA1DQ01668 2161 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 A0A1B0GVI7 797 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 GMDSO60547 372 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 CCL1P22362 96 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 EEF1B2P24534 225 aaKnown RBP15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 C21orf33P30042 268 aaPredicted RBP15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 WNT4P56705 351 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 BDH1Q02338 343 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 RIPPLY1Q0D2K3 151 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 ALKBH1Q13686 389 aaKnown RBP15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 TESK1Q15569 626 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 WDR38Q5JTN6 314 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 SHEQ5VZ18 495 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 Q6ZSR3 168 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 KRT74Q7RTS7 529 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 PLPP7Q8NBV4 271 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 SEMA6DQ8NFY4 1073 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 OR56B2PQ8NGI1 322 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 OR51E1Q8TCB6 317 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 RHNO1Q9BSD3 238 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 COMMD4Q9H0A8 199 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 DECR2Q9NUI1 292 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 ZNF319Q9P2F9 582 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 SLC22A13Q9Y226 551 aa15.27■□□□□ 0.04
SSSCA1-201ENST00000309328 DSCAMO60469 2012 aa15.27■□□□□ 0.03
SSSCA1-201ENST00000309328 SYT7O43581 403 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 NAT2P11245 290 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 TNFRSF1AP19438 455 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 GNALP38405 381 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 CELF2-AS1Q8N7Q2 184 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 NANOGP1Q8N7R0 232 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 CXXC4Q9H2H0 198 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 ISG20L2Q9H9L3 353 aaKnown RBP15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 UBAP1Q9NZ09 502 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 FRRS1LQ9P0K9 344 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 IL19Q9UHD0 177 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 LRCH1Q9Y2L9 728 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 MPC1Q9Y5U8 109 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 MAST4O15021 2626 aa15.26■□□□□ 0.03
SSSCA1-201ENST00000309328 CSMD2Q7Z408 3487 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 ZNF816-ZNF321PA0A0X1KG74 233 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 ZSCAN5BA6NJL1 495 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 IFNL4K9M1U5 179 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 CST4P01036 141 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 ACHEP22303 614 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 PSMB10P40306 273 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 SRP9P49458 86 aaKnown RBP15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 ACSM1Q08AH1 577 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 OR5AS1Q8N127 324 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 PRSS35Q8N3Z0 413 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 ZNF676Q8N7Q3 588 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 BHLHE23Q8NDY6 225 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 ELMOD3Q96FG2 381 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 PERPQ96FX8 193 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 LYZL4Q96KX0 146 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 TECTBQ96PL2 329 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 SORCS2Q96PQ0 1159 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 SAP30LQ9HAJ7 183 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 PLEKHA1Q9HB21 404 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 MSL2Q9HCI7 577 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 CLEC2DQ9UHP7 191 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 ENPP5Q9UJA9 477 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 HHLA2Q9UM44 414 aa15.25■□□□□ 0.03
SSSCA1-201ENST00000309328 TRBV2A0A0J9YWF9 115 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 C5orf63A6NC05 138 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 ANXA2P2A6NMY6 339 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 SPRY3O43610 288 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 IGHV1-46P01743 117 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 CDH15P55291 814 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 TNFAIP6P98066 277 aaPredicted RBP15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 CDK5R1Q15078 307 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 ALKBH6Q3KRA9 238 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 TMEM255AQ5JRV8 349 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 OR2G6Q5TZ20 316 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 SVOPQ8N4V2 548 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 ZNF485Q8NCK3 441 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 OR2Z1Q8NG97 314 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 OR5AK2Q8NH90 309 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 RPS4Y2Q8TD47 263 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 THRSPQ92748 146 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 ERGIC1Q969X5 290 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 RNF166Q96A37 237 aaPredicted RBP15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 SMIM19Q96E16 107 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 FAM71F1Q96KD3 344 aaPredicted RBP15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 PAPOLGQ9BWT3 736 aaKnown RBP15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 CCDC90BQ9GZT6 254 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 DLL4Q9NR61 685 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 C14orf119Q9NWQ9 140 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 PAK1IP1Q9NWT1 392 aaPredicted RBP15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 V9GYS6 101 aa15.24■□□□□ 0.03
SSSCA1-201ENST00000309328 A0A1B0GTI1 187 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 LOC107986453A0A1B0GWG9 222 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 OR4C45A6NMZ5 311 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 NDUFS8O00217 210 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 P2RY10O00398 339 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 TPD52L2O43399 206 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms