RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 GNG8Q9UK08 70 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 MRPS33Q9Y291 106 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 AK6Q9Y3D8 172 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 IER3IP1Q9Y5U9 82 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 NBEAL1Q6ZS30 2694 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 MED12LQ86YW9 2145 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 SVEP1Q4LDE5 3571 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 LOC102723996A0A087X1L8 192 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 A0A0A6YYH2 397 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 IGHV3-20A0A0C4DH32 117 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 A6NJ64 397 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ACOD1A6NK06 481 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 TMEM212A6NML5 194 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 AHRRA9YTQ3 701 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 IDSB3KWA1 339 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 MCIDASD6RGH6 385 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 H0YGG7 62 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ARPC1BO15143 372 aaKnown RBP4.31□□□□□ -1.72
CKS1B-201ENST00000308987 P2RX6O15547 441 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 GMDSO60547 372 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 PRAMEF2O60811 474 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF254O75437 659 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 UPK3AO75631 287 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 RP2O75695 350 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 SERPINI2O75830 405 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 PMS2P2O95744 297 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 CFDP00746 253 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-201ENST00000308987 STATHP02808 62 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 SERPINA7P05543 415 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 NGFRP08138 427 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 CD14P08571 375 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 HOXD4P09016 255 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-201ENST00000308987 FGF2P09038 288 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ACSM4P0C7M7 580 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 CLUP10909 449 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 GABRA1P14867 456 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF250P15622 560 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 RPA2P15927 270 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 NAGAP17050 411 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 CTRB1P17538 263 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 IGFBP2P18065 325 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 CXCL2P19875 107 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 AGTR1P30556 359 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 NUP62P37198 522 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-201ENST00000308987 RAD52P43351 418 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 TAS2R20P59543 309 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ACTBP60709 375 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ARF3P61204 181 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ACTG1P63261 375 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ARG2P78540 354 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 HSF1Q00613 529 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 PSG6Q00889 435 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 TLE4Q04727 773 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 RASGEF1BQ0VAM2 473 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 CBFBQ13951 182 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 HLXQ14774 488 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-201ENST00000308987 CLVS2Q5SYC1 327 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 LINC01590Q5TEZ4 76 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 FCRLBQ6BAA4 426 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 SFRP4Q6FHJ7 346 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-201ENST00000308987 CTRB2Q6GPI1 263 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 WBP2NLQ6ICG8 309 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 SLC25A25Q6KCM7 469 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 LPCAT3Q6P1A2 487 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ANKRD16Q6P6B7 361 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 TMEM205Q6UW68 189 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 APOOLQ6UXV4 268 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 STAC2Q6ZMT1 411 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 Q6ZTK2 550 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 LANCL3Q6ZV70 420 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 FCRLAQ7L513 359 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 PRSS45Q7RTY3 260 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 LRRTM1Q86UE6 522 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 CDC20BQ86Y33 519 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 OR4N5Q8IXE1 308 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 STPG2Q8N412 459 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 MDS2Q8NDY4 140 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 CPEB3Q8NE35 698 aaKnown RBP4.31□□□□□ -1.72
CKS1B-201ENST00000308987 SDR9C7Q8NEX9 313 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 OR13C5Q8NGS8 318 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 OR6K3Q8NGY3 331 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 OR6N1Q8NGY5 312 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 OR4K13Q8NH42 304 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 OR5AK2Q8NH90 309 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 SYNPRQ8TBG9 265 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ASB17Q8WXJ9 295 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 RGP1Q92546 391 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-201ENST00000308987 PTX4Q96A99 478 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ANKRD9Q96BM1 317 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-201ENST00000308987 C3orf49Q96BT1 292 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ORAI1Q96D31 301 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ELMOD3Q96FG2 381 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 KLHL15Q96M94 604 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 VSTM2LQ96N03 204 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 DMRTA2Q96SC8 542 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 SLC25A21Q9BQT8 299 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ALG12Q9BV10 488 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 COMMD4Q9H0A8 199 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 SHARPINQ9H0F6 387 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF700Q9H0M5 742 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms