RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SPOCK1Q08629 439 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 PMPCAQ10713 525 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 TNK1Q13470 666 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 DDI2Q5TDH0 399 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 HIST2H2BCQ6DN03 193 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF529Q6P280 563 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 DPPA2Q7Z7J5 298 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 LYPD6Q86Y78 171 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 OR52H1Q8NGJ2 320 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 TRMT10AQ8TBZ6 339 aaKnown RBP6.03□□□□□ -1.44
PTCD2-201ENST00000308077 ACOT12Q8WYK0 555 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 KCTD12Q96CX2 325 aaKnown RBP6.03□□□□□ -1.44
PTCD2-201ENST00000308077 REEP6Q96HR9 211 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 SFXN3Q9BWM7 321 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 Q9UFV3 132 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 RHBDD3Q9Y3P4 386 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 JMJD1CQ15652 2540 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 EIF4EP06730 217 aaKnown RBP6.03□□□□□ -1.44
PTCD2-201ENST00000308077 CD37P11049 281 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF20P17024 532 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 ELK1P19419 428 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 CCNOP22674 350 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 ACKR3P25106 362 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 CD40LGP29965 261 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 GNALP38405 381 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 WNT5AP41221 380 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 UBE2NP61088 152 aaKnown RBP6.03□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF92Q03936 586 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 FAM166AQ6J272 317 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 MZT2AQ6P582 158 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 BEND4Q6ZU67 534 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 RNF144BQ7Z419 303 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 SERPINA12Q8IW75 414 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 OR5AS1Q8N127 324 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 C1orf162Q8NEQ5 155 aaPredicted RBP6.03□□□□□ -1.44
PTCD2-201ENST00000308077 OR13C9Q8NGT0 318 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 LGALS14Q8TCE9 139 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 CEP19Q96LK0 163 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 POFUT1Q9H488 388 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 CKLFQ9UBR5 152 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 CGGBP1Q9UFW8 167 aaPredicted RBP6.03□□□□□ -1.44
PTCD2-201ENST00000308077 IGKV1-9A0A0C4DH69 117 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 hCG_38984A0A1B0GV85 526 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 LOC390937A0A1W2PQ73 354 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 AGFG2O95081 481 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 NGFP01138 241 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 SERPINA5P05154 406 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 FAHP16930 419 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 BMP5P22003 454 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 CFPP27918 469 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 APLNRP35414 380 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 PPP5CP53041 499 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 ZNF45Q02386 682 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 PLP2Q04941 152 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 RBPJQ06330 500 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 PLA2G7Q13093 441 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 P2RY6Q15077 328 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 ZNF79Q15937 498 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 DMRTC1Q5HYR2 192 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 SPANXN2Q5MJ10 180 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 C16orf87Q6PH81 154 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 CNIH2Q6PI25 160 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 BHLHA15Q7RTS1 189 aaPredicted RBP6.02□□□□□ -1.45
PTCD2-201ENST00000308077 LIX1LQ8IVB5 337 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 CCDC36Q8IYA8 594 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 ZNF101Q8IZC7 436 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 SAMD12Q8N8I0 201 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 SLC30A7Q8NEW0 376 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 OR1M1Q8NGA1 313 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 SPSB4Q96A44 273 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 DIRAS2Q96HU8 199 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 SOSTQ9BQB4 213 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 KCNK15Q9H427 330 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 LIN7BQ9HAP6 207 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 ABRACLQ9P1F3 81 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 OR5V1Q9UGF6 321 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 SPATA2Q9UM82 520 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 PIGLQ9Y2B2 252 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 NOTCH1P46531 2555 aa6.02□□□□□ -1.45
PTCD2-201ENST00000308077 SLC17A2O00624 439 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 XRCC2O43543 280 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 SULT1B1O43704 296 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 HOXB1P14653 301 aaPredicted RBP6.01□□□□□ -1.45
PTCD2-201ENST00000308077 ZNF12P17014 697 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 BDKRB2P30411 391 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 THBS4P35443 961 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 EVX1P49640 407 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 IDH3GP51553 393 aaPredicted RBP6.01□□□□□ -1.45
PTCD2-201ENST00000308077 FAM3AP98173 230 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 P2RY14Q15391 338 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 CRIP3Q6Q6R5 217 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 Q6ZNX1 250 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 C17orf78Q8N4C9 275 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 DTX3Q8N9I9 347 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 RELL2Q8NC24 303 aaPredicted RBP6.01□□□□□ -1.45
PTCD2-201ENST00000308077 ST6GALNAC3Q8NDV1 305 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 OR52N4Q8NGI2 321 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 OR5D14Q8NGL3 314 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 PRR7Q8TB68 274 aa6.01□□□□□ -1.45
PTCD2-201ENST00000308077 SLC25A28Q96A46 364 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms