RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 Q5PR19 223 aa19.02■□□□□ 0.63
HOXD4-201ENST00000306324 OR13G1Q8NGZ3 307 aa19.02■□□□□ 0.63
HOXD4-201ENST00000306324 OR2G2Q8NGZ5 317 aa19.02■□□□□ 0.63
HOXD4-201ENST00000306324 SGCDQ92629 289 aa19.02■□□□□ 0.63
HOXD4-201ENST00000306324 ELMOD3Q96FG2 381 aa19.02■□□□□ 0.63
HOXD4-201ENST00000306324 SLC30A2Q9BRI3 323 aa19.02■□□□□ 0.63
HOXD4-201ENST00000306324 DECR2Q9NUI1 292 aa19.02■□□□□ 0.63
HOXD4-201ENST00000306324 OTOGQ6ZRI0 2925 aa19.02■□□□□ 0.63
HOXD4-201ENST00000306324 CRHBPP24387 322 aa19.01■□□□□ 0.63
HOXD4-201ENST00000306324 NANOS3P60323 173 aaKnown RBP19.01■□□□□ 0.63
HOXD4-201ENST00000306324 SLC35A2P78381 396 aa19.01■□□□□ 0.63
HOXD4-201ENST00000306324 OR8B8Q15620 311 aa19.01■□□□□ 0.63
HOXD4-201ENST00000306324 RBM48Q5RL73 367 aaKnown RBP19.01■□□□□ 0.63
HOXD4-201ENST00000306324 EGFL6Q8IUX8 553 aa19.01■□□□□ 0.63
HOXD4-201ENST00000306324 OR10AD1Q8NGE0 317 aa19.01■□□□□ 0.63
HOXD4-201ENST00000306324 DIRC2Q96SL1 478 aa19.01■□□□□ 0.63
HOXD4-201ENST00000306324 FRRS1LQ9P0K9 344 aa19.01■□□□□ 0.63
HOXD4-201ENST00000306324 DYSFO75923 2080 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 ANKRD30BLA7E2S9 258 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 E9PI62 339 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 H0YL77 283 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 H3BSH0 61 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 MYL12BO14950 172 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 NCR1O76036 304 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 IGLV3-1P01715 115 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 HPXP02790 462 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 HLA-DPB1P04440 258 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 CA6P23280 308 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 TNFSF4P23510 183 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 KIR3DL2P43630 455 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 MRPL28Q13084 256 aaKnown RBP19■□□□□ 0.63
HOXD4-201ENST00000306324 TNK1Q13470 666 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 FDX2Q6P4F2 183 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 GATAD2BQ8WXI9 593 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 CXXC4Q9H2H0 198 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 NKIRAS2Q9NYR9 191 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 MRPL15Q9P015 296 aaKnown RBP19■□□□□ 0.63
HOXD4-201ENST00000306324 ERVK-18Q9QC07 812 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 BLOC1S6Q9UL45 172 aa19■□□□□ 0.63
HOXD4-201ENST00000306324 ITPR3Q14573 2671 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 MLNRO43193 412 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 ADH4P08319 380 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 ACKR3P25106 362 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 MAP2K3P46734 347 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 TNFAIP6P98066 277 aaPredicted RBP18.99■□□□□ 0.63
HOXD4-201ENST00000306324 ALKBH1Q13686 389 aaKnown RBP18.99■□□□□ 0.63
HOXD4-201ENST00000306324 FAM209AQ5JX71 171 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 KLBQ86Z14 1044 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 FTMTQ8N4E7 242 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 CSNK2A3Q8NEV1 391 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 OR52N1Q8NH53 320 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 DUSP21Q9H596 190 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 SAP30LQ9HAJ7 183 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 ERGIC3Q9Y282 383 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 TANC2Q9HCD6 1990 aa18.99■□□□□ 0.63
HOXD4-201ENST00000306324 A0A1B0GVI7 797 aa18.98■□□□□ 0.63
HOXD4-201ENST00000306324 MTRF1O75570 445 aaKnown RBP18.98■□□□□ 0.63
HOXD4-201ENST00000306324 DHRS3O75911 302 aa18.98■□□□□ 0.63
HOXD4-201ENST00000306324 UBCP0CG48 685 aaKnown RBP18.98■□□□□ 0.63
HOXD4-201ENST00000306324 DAOP14920 347 aa18.98■□□□□ 0.63
HOXD4-201ENST00000306324 EEF1B2P24534 225 aaKnown RBP18.98■□□□□ 0.63
HOXD4-201ENST00000306324 GTF2A1P52655 376 aaPredicted RBP18.98■□□□□ 0.63
HOXD4-201ENST00000306324 CARTPTQ16568 116 aa18.98■□□□□ 0.63
HOXD4-201ENST00000306324 SHEQ5VZ18 495 aa18.98■□□□□ 0.63
HOXD4-201ENST00000306324 RDH10Q8IZV5 341 aa18.98■□□□□ 0.63
HOXD4-201ENST00000306324 ZNF525Q8N782 197 aa18.98■□□□□ 0.63
HOXD4-201ENST00000306324 SEMA6DQ8NFY4 1073 aa18.98■□□□□ 0.63
HOXD4-201ENST00000306324 HAVCR2Q8TDQ0 301 aa18.98■□□□□ 0.63
HOXD4-201ENST00000306324 DVL3Q92997 716 aaPredicted RBP18.98■□□□□ 0.63
HOXD4-201ENST00000306324 ADAT1Q9BUB4 502 aaKnown RBP18.98■□□□□ 0.63
HOXD4-201ENST00000306324 PAPOLGQ9BWT3 736 aaKnown RBP18.98■□□□□ 0.63
HOXD4-201ENST00000306324 CCDC90BQ9GZT6 254 aa18.98■□□□□ 0.63
HOXD4-201ENST00000306324 EGLN1Q9GZT9 426 aa18.98■□□□□ 0.63
HOXD4-201ENST00000306324 SLC22A4Q9H015 551 aa18.98■□□□□ 0.63
HOXD4-201ENST00000306324 CELSR1Q9NYQ6 3014 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 A0A1B0GTI1 187 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 F5H5P2 479 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 SYT7O43581 403 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 RGS10O43665 173 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 CCR9P51686 369 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 OR8G1Q15617 311 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 DOK3Q7L591 496 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 UBASH3BQ8TF42 649 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 BABAM2Q9NXR7 383 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 RHBDD3Q9Y3P4 386 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 LOC107986453A0A1B0GWG9 222 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 LOC390937A0A1W2PQ73 354 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 LYNX1G3V0Z9 82 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 CDC14BO60729 498 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 CD55P08174 381 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 LYNX1P0DP58 116 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 ATP6V1B1P15313 513 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 GNALP38405 381 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 TGM4P49221 684 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 RIPPLY1Q0D2K3 151 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 CLEC12BQ2HXU8 276 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 SPRNQ5BIV9 151 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 TMEM244Q5VVB8 128 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 XAF1Q6GPH4 301 aa18.97■□□□□ 0.63
HOXD4-201ENST00000306324 PRSS57Q6UWY2 283 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms