RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 PI3P19957 117 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 RAC1P63000 192 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 ZNF425Q6IV72 752 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 OR4C16Q8NGL9 310 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 ZG16BQ96DA0 208 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 PCBP3P57721 371 aaKnown RBP14.32□□□□□ -0.12
USP42-201ENST00000306177 TMEM182Q6ZP80 229 aaPredicted RBP14.32□□□□□ -0.12
USP42-201ENST00000306177 LYG2Q86SG7 212 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 CDC20BQ86Y33 519 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 OR2AK2Q8NG84 335 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 OR11G2Q8NGC1 345 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 KISS1RQ969F8 398 aaPredicted RBP14.32□□□□□ -0.12
USP42-201ENST00000306177 GNPNAT1Q96EK6 184 aaPredicted RBP14.32□□□□□ -0.12
USP42-201ENST00000306177 ZNF764Q96H86 408 aaPredicted RBP14.32□□□□□ -0.12
USP42-201ENST00000306177 FOCADQ5VW36 1801 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 NUDT19A8MXV4 375 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 RPS2P15880 293 aaKnown RBP14.32□□□□□ -0.12
USP42-201ENST00000306177 GALP22466 123 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 XAF1Q6GPH4 301 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 OR2A2Q6IF42 318 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 CMTM2Q8TAZ6 248 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 SIRT3Q9NTG7 399 aaPredicted RBP14.32□□□□□ -0.12
USP42-201ENST00000306177 KLK11Q9UBX7 282 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 FABP6P51161 128 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 TIAL1Q01085 375 aaKnown RBP eCLIP14.31□□□□□ -0.12
USP42-201ENST00000306177 SNTB1Q13884 538 aaKnown RBP14.31□□□□□ -0.12
USP42-201ENST00000306177 RAB35Q15286 201 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 ZNF141Q15928 474 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 IL34Q6ZMJ4 242 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 TMEM229BQ8NBD8 167 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 OR4D9Q8NGE8 314 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 SLC35E1Q96K37 410 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 TRGV5A0A0B4J1U4 118 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 ADIRFQ15847 76 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 S1PR3Q99500 378 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 PLEKHA2Q9HB19 425 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 SMCO4Q9NRQ5 59 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 NDRG3Q9UGV2 375 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 E5RGE8 158 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 MT-CO3P00414 261 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 TAGLN2P37802 199 aaKnown RBP14.31□□□□□ -0.12
USP42-201ENST00000306177 NOVA1P51513 510 aaKnown RBP14.31□□□□□ -0.12
USP42-201ENST00000306177 FAM185AQ8N0U4 392 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 OR10X1Q8NGY0 326 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 SP7Q8TDD2 431 aaPredicted RBP14.31□□□□□ -0.12
USP42-201ENST00000306177 ASB13Q8WXK3 278 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 EXOGQ9Y2C4 368 aaKnown RBP14.31□□□□□ -0.12
USP42-201ENST00000306177 NSG2Q9Y328 171 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 KPTNQ9Y664 436 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 BRWD3Q6RI45 1802 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 ABCD4O14678 606 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 PLPP2O43688 288 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 MOSPD3O75425 235 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 PPP1CAP62136 330 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 DHODHQ02127 395 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 FUT7Q11130 342 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 BAMBIQ13145 260 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 RTL8BQ17RB0 113 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 CYSLTR2Q9NS75 346 aa14.31□□□□□ -0.12
USP42-201ENST00000306177 TRIP12Q14669 1992 aaPredicted RBP14.31□□□□□ -0.12
USP42-201ENST00000306177 TRAV17A0A0B4J275 112 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 IGHA2P01877 340 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 ACKR3P25106 362 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 C12orf10Q9HB07 376 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 MBD1Q9UIS9 605 aaPredicted RBP14.3□□□□□ -0.12
USP42-201ENST00000306177 FBXL4Q9UKA2 621 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 LRP3O75074 770 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 IL9P15248 144 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 RPL12P30050 165 aaKnown RBP14.3□□□□□ -0.12
USP42-201ENST00000306177 PIGPP57054 158 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 OR2B11Q5JQS5 317 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 SPANXN5Q5MJ07 72 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 AVPI1Q5T686 147 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 TRILQ7L0X0 811 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 SPSB1Q96BD6 273 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 GNRHR2Q96P88 292 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 FBXO34Q9NWN3 711 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 AK3Q9UIJ7 227 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 CEP290O15078 2479 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 TSTD3H0UI37 97 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 SPRY1O43609 319 aaPredicted RBP14.3□□□□□ -0.12
USP42-201ENST00000306177 GABRA4P48169 554 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 SMIM21Q3B7S5 101 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 WDR38Q5JTN6 314 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 RGS7BPQ6MZT1 257 aaPredicted RBP14.3□□□□□ -0.12
USP42-201ENST00000306177 SSX9Q7RTT3 188 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 TMPRSS7Q7RTY8 843 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 ZNF321PQ8N8H1 164 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 OIT3Q8WWZ8 545 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 C2orf50Q96LR7 162 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 SSSCA1O60232 199 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 CLN5O75503 358 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 MAMSTRQ6ZN01 415 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 ABI3BPQ7Z7G0 1075 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 RTN4IP1Q8WWV3 396 aaPredicted RBP14.3□□□□□ -0.12
USP42-201ENST00000306177 PELI1Q96FA3 418 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 SLIRPQ9GZT3 109 aaKnown RBP14.3□□□□□ -0.12
USP42-201ENST00000306177 TUBG2Q9NRH3 451 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 PLA2G3Q9NZ20 509 aa14.3□□□□□ -0.12
USP42-201ENST00000306177 TOX3O15405 576 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms