RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 C20orf141Q9NUB4 165 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 COA3Q9Y2R0 106 aaPredicted RBP12.2□□□□□ -0.46
TRIM56-201ENST00000306085 KLRC4-KLRK1H3BQV0 150 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 KLF7O75840 302 aaPredicted RBP12.2□□□□□ -0.46
TRIM56-201ENST00000306085 BCL3P20749 454 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 LAIR1Q6GTX8 287 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 MAML2Q8IZL2 1156 aaPredicted RBP12.2□□□□□ -0.46
TRIM56-201ENST00000306085 TNFRSF10CO14798 259 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 ARSAP15289 507 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 GCAP28676 217 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 COMPP49747 757 aaPredicted RBP12.2□□□□□ -0.46
TRIM56-201ENST00000306085 ASCL1P50553 236 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 MARCH3Q86UD3 253 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 OR51E1Q8TCB6 317 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 ATP5SQ99766 215 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 HSPB8Q9UJY1 196 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 CADM3Q8N126 398 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 TMEM102Q8N9M5 508 aaPredicted RBP12.2□□□□□ -0.46
TRIM56-201ENST00000306085 GALMQ96C23 342 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 OR5B21A6NL26 309 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 J3KRW8 73 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 FUCA1P04066 466 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 SP1P08047 785 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 ANKRD34CP0C6C1 535 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF788Q6ZQV5 615 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 MUC15Q8N387 334 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 TBX15Q96SF7 602 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 RGS13O14921 159 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 AKR7A2O43488 359 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 CA12O43570 354 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 CTNSO60931 367 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 NAT6Q93015 286 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 NARFLQ9H6Q4 476 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 LMAN1LQ9HAT1 526 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 DRGXA6NNA5 263 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 FGF4P08620 206 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 GABRB1P18505 474 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 ZP3P21754 424 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 MED1Q15648 1581 aaPredicted RBP12.19□□□□□ -0.46
TRIM56-201ENST00000306085 B4GALT3O60512 393 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 HLXQ14774 488 aaPredicted RBP12.19□□□□□ -0.46
TRIM56-201ENST00000306085 SLC25A22Q9H936 323 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 DIMT1Q9UNQ2 313 aaKnown RBP12.19□□□□□ -0.46
TRIM56-201ENST00000306085 RPL30P62888 115 aaKnown RBP12.19□□□□□ -0.46
TRIM56-201ENST00000306085 GABRA6Q16445 453 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 LINC00469Q8N7U9 141 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 PPP1R1CQ8WVI7 109 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 ATOH1Q92858 354 aaPredicted RBP12.19□□□□□ -0.46
TRIM56-201ENST00000306085 BCL2L11O43521 198 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 DUSP2Q05923 314 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 TMEM251Q8N6I4 163 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 PRSS16Q9NQE7 514 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 BCL9O00512 1426 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 FZD6O60353 706 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 SNRPGP62308 76 aaKnown RBP12.19□□□□□ -0.46
TRIM56-201ENST00000306085 FOXC2Q99958 501 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 NAA60Q9H7X0 242 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 PAM16Q9Y3D7 125 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 CYB561P49447 251 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 NXPE3Q969Y0 559 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 HDAC8Q9BY41 377 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 FAM208AQ9UK61 1670 aaKnown RBP12.19□□□□□ -0.46
TRIM56-201ENST00000306085 IGHEP01854 428 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 SMIM21Q3B7S5 101 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 OR52B4Q8NGK2 314 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 OR1B1Q8NGR6 318 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 H3BNC9 293 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 CD99P14209 185 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 PLP1P60201 277 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 TMEM65Q6PI78 240 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF680Q8NEM1 530 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF552Q9H707 407 aaPredicted RBP12.19□□□□□ -0.46
TRIM56-201ENST00000306085 TNFRSF19Q9NS68 423 aa12.19□□□□□ -0.46
TRIM56-201ENST00000306085 GLCCI1Q86VQ1 547 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 LSRQ86X29 649 aaPredicted RBP12.18□□□□□ -0.46
TRIM56-201ENST00000306085 MST1RQ04912 1400 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 OR2T8A6NH00 312 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 RRP8O43159 456 aaKnown RBP12.18□□□□□ -0.46
TRIM56-201ENST00000306085 CD1EP15812 388 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 RAB32Q13637 225 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 NPY5RQ15761 445 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 H1FNTQ75WM6 255 aaPredicted RBP12.18□□□□□ -0.46
TRIM56-201ENST00000306085 HSD3B7Q9H2F3 369 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 AUP1Q9Y679 476 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 CD14P08571 375 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 ACAA1P09110 424 aaPredicted RBP12.18□□□□□ -0.46
TRIM56-201ENST00000306085 DRD1P21728 446 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 C1orf140Q5VVS0 124 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 OR2I1PQ8NGU4 316 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 MARCH1Q8TCQ1 289 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 MMP26Q9NRE1 261 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 OR1D5P58170 312 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 OR52N5Q8NH56 324 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 EMC6Q9BV81 110 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 TMEM9BQ9NQ34 198 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 ZGRF1Q86YA3 2104 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 KCNJ3P48549 501 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 FGF8P55075 233 aaPredicted RBP12.18□□□□□ -0.46
TRIM56-201ENST00000306085 COX20Q5RI15 118 aa12.18□□□□□ -0.46
TRIM56-201ENST00000306085 OR2A14Q96R47 310 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms