RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 DLSTP36957 453 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 WASP42768 502 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 CX3CR1P49238 355 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 CLDN6P56747 220 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 RAB11BQ15907 218 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 C14orf28Q4W4Y0 310 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 OR2A2Q6IF42 318 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 UNQ6126/PRO20091Q6UXV3 157 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ASCL4Q6XD76 172 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ZNF704Q6ZNC4 412 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 CACUL1Q86Y37 369 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 DMRTC2Q8IXT2 367 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 ARRDC1Q8N5I2 433 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 TMEM156Q8N614 296 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ZNF283Q8N7M2 679 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ZNF784Q8NCA9 323 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 OR8U1Q8NH10 309 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ZNF845Q96IR2 970 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 GINS3Q9BRX5 216 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 SLITRK2Q9H156 845 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 SYT4Q9H2B2 425 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 NKX2-4Q9H2Z4 354 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 RAB18Q9NP72 206 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 IGHV5-51A0A0C4DH38 117 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ELOA3DA6NLF2 546 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 SCDO00767 359 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 RRP8O43159 456 aaKnown RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 GAPDHP04406 335 aaKnown RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 SFTA3P0C7M3 94 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 THEGLP0DJG4 465 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 PGCP20142 388 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 OTX1P32242 354 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 HRH1P35367 487 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 GPX4P36969 197 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 HAAOP46952 286 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 CTXN1P60606 82 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ACTBP60709 375 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 SNRPEP62304 92 aaKnown RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 ACTG1P63261 375 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 DLX2Q07687 328 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 PPA1Q15181 289 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ELOA3BQ3SY89 546 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 PYY3Q5JQD4 70 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 SLC18B1Q6NT16 456 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 H3F3CQ6NXT2 135 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 RABEPKQ7Z6M1 372 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 JAZF1Q86VZ6 243 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 BEST3Q8N1M1 668 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 BPIFB2Q8N4F0 458 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ZNF433Q8N7K0 673 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 ELOA3Q8NG57 546 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 PLPPR1Q8TBJ4 325 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 COL26A1Q96A83 441 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 CLDN23Q96B33 292 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ZBTB8AQ96BR9 441 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ZNF587Q96SQ5 575 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 SPSB2Q99619 263 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 TMEM231Q9H6L2 316 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ELOVL3Q9HB03 270 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 RHOFQ9HBH0 211 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ZNF304Q9HCX3 659 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 STARD5Q9NSY2 213 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 TAS2R3Q9NYW6 316 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ZNF581Q9P0T4 197 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 GRHPRQ9UBQ7 328 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ATPIF1Q9UII2 106 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 DHRS7CA6NNS2 312 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 C17orf105B2RV13 164 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 ADAP1O75689 374 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 HLA-AP01891 365 aaKnown RBP4.78□□□□□ -1.64
VPS50-202ENST00000305866 ZNF43P17038 809 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 MAOAP21397 527 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 SERPINF1P36955 418 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 CHD3Q12873 2000 aaKnown RBP4.78□□□□□ -1.64
VPS50-202ENST00000305866 MEF2DQ14814 521 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 DNLZQ5SXM8 178 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 RAB12Q6IQ22 244 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 SLC16A13Q7RTY0 426 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 FAM220AQ7Z4H9 259 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 KRT77Q7Z794 578 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 FAM219AQ8IW50 185 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 SPAG16Q8N0X2 631 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 LRTM2Q8N967 370 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 BOLLQ8N9W6 283 aaKnown RBP4.78□□□□□ -1.64
VPS50-202ENST00000305866 OR5L2Q8NGL0 311 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 C2CD4CQ8TF44 421 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 ERGIC1Q969X5 290 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 ZDHHC12Q96GR4 267 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 MAP3K3Q99759 626 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 WDR77Q9BQA1 342 aaPredicted RBP4.78□□□□□ -1.64
VPS50-202ENST00000305866 TM2D1Q9BX74 207 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 COMMD4Q9H0A8 199 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 BIN3Q9NQY0 253 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 DNAJB11Q9UBS4 358 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 POMT1Q9Y6A1 747 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 SESN1Q9Y6P5 492 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 LY6G6EA0A0G2JKS1 128 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 KIAA1324LA8MWY0 1029 aaPredicted RBP4.78□□□□□ -1.64
VPS50-202ENST00000305866 RNASEK-C17orf49H0YIS7 233 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 DEDDO75618 318 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms