RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 METTL12A8MUP2 240 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 CLN5O75503 358 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 OPN1LWP04000 364 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 GJA4P35212 333 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 SKP2Q13309 424 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 TMEM31Q5JXX7 168 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 MAP3K3Q99759 626 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 VDAC3Q9Y277 283 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 CYR61O00622 381 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 FGF16O43320 207 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 SLC34A2O95436 690 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 IFNA10P01566 189 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 HERV-K104P61576 105 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 RAB1AP62820 205 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 HHEXQ03014 270 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 ANKRD33Q7Z3H0 272 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 FAM160A2Q8N612 972 aaPredicted RBP11.66□□□□□ -0.54
TRIM35-201ENST00000305364 MEGF10Q96KG7 1140 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 LRRC3BQ96PB8 259 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 PRRX2Q99811 253 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 EMC6Q9BV81 110 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 OR10A2Q9H208 303 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 DNAJB11Q9UBS4 358 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 SLC5A6Q9Y289 635 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 COLCA2A8K830 154 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 HCRTR1O43613 425 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 BPNT1O95861 308 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 PPA1Q15181 289 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 NEK7Q8TDX7 302 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 ANKRD9Q96BM1 317 aaPredicted RBP11.65□□□□□ -0.54
TRIM35-201ENST00000305364 PTGES2Q9H7Z7 377 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 PLXNB3Q9ULL4 1909 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 A6NIZ1 184 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 RAB27BO00194 218 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 CXCL10P02778 98 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 JMJD7P0C870 316 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 TMEM225BP0DP42 221 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 CD79AP11912 226 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 ALDH3B1P43353 468 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 ZNF84P51523 738 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 RAP1BP61224 184 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 FHL5Q5TD97 284 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 RTL10Q7L3V2 364 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 BAHD1Q8TBE0 780 aaPredicted RBP11.65□□□□□ -0.54
TRIM35-201ENST00000305364 TMEM234Q8WY98 164 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 RHOVQ96L33 236 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 NXF5Q9H1B4 397 aaKnown RBP11.65□□□□□ -0.54
TRIM35-201ENST00000305364 S1PR5Q9H228 398 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 METTL1Q9UBP6 276 aaKnown RBP11.65□□□□□ -0.54
TRIM35-201ENST00000305364 ZNF107Q9UII5 783 aaPredicted RBP11.65□□□□□ -0.54
TRIM35-201ENST00000305364 KIF26BQ2KJY2 2108 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 MDC1Q14676 2089 aaKnown RBP11.65□□□□□ -0.54
TRIM35-201ENST00000305364 ZNF726A6NNF4 738 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 ZNF587BE7ETH6 402 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 CYB5BO43169 146 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 FMODQ06828 376 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 PHF19Q5T6S3 580 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 ADAMTS17Q8TE56 1095 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 HOXB13Q92826 284 aaPredicted RBP11.65□□□□□ -0.54
TRIM35-201ENST00000305364 NIPSNAP3BQ9BS92 247 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 OPA3Q9H6K4 179 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 PARPBPQ9NWS1 579 aa11.65□□□□□ -0.54
TRIM35-201ENST00000305364 FAM230AA0A1W2PPH8 454 aa11.65□□□□□ -0.55
TRIM35-201ENST00000305364 LMX1BO60663 402 aa11.65□□□□□ -0.55
TRIM35-201ENST00000305364 MOSPD3O75425 235 aa11.65□□□□□ -0.55
TRIM35-201ENST00000305364 ABHD16AO95870 558 aa11.65□□□□□ -0.55
TRIM35-201ENST00000305364 CFIP05156 583 aa11.65□□□□□ -0.55
TRIM35-201ENST00000305364 ASCL1P50553 236 aa11.65□□□□□ -0.55
TRIM35-201ENST00000305364 SSTP61278 116 aa11.65□□□□□ -0.55
TRIM35-201ENST00000305364 C1orf140Q5VVS0 124 aa11.65□□□□□ -0.55
TRIM35-201ENST00000305364 EMG1Q92979 244 aaKnown RBP11.65□□□□□ -0.55
TRIM35-201ENST00000305364 CCNL2Q96S94 520 aaPredicted RBP11.65□□□□□ -0.55
TRIM35-201ENST00000305364 NICN1Q9BSH3 213 aa11.65□□□□□ -0.55
TRIM35-201ENST00000305364 SLC35B3Q9H1N7 401 aa11.65□□□□□ -0.55
TRIM35-201ENST00000305364 C19orf12Q9NSK7 152 aa11.65□□□□□ -0.55
TRIM35-201ENST00000305364 FABP4P15090 132 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 OGFOD3Q6PK18 319 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 NPSR1Q6W5P4 371 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 ATG4DQ86TL0 474 aaPredicted RBP11.64□□□□□ -0.55
TRIM35-201ENST00000305364 SHISA5Q8N114 240 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 RPS4Y2Q8TD47 263 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 HAS2Q92819 552 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 OR10C1Q96KK4 312 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 VSTM2LQ96N03 204 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 CDCA3Q99618 268 aaPredicted RBP11.64□□□□□ -0.55
TRIM35-201ENST00000305364 ZNF2Q9BSG1 426 aaPredicted RBP11.64□□□□□ -0.55
TRIM35-201ENST00000305364 SUCNR1Q9BXA5 334 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 TXNIPQ9H3M7 391 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 PARP11Q9NR21 331 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 POMT1Q9Y6A1 747 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 PIAS3Q9Y6X2 628 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 PHOX2AO14813 284 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 FPR2P25090 351 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 ZNF260Q3ZCT1 412 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 PHLDA2Q53GA4 152 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 FAM57BQ71RH2 274 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 CPEB2Q7Z5Q1 589 aaKnown RBP11.64□□□□□ -0.55
TRIM35-201ENST00000305364 ARHGAP5-AS1Q96IT6 56 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 GGACTQ9BVM4 153 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 MYOZ1Q9NP98 299 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms