RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ZNF788Q6ZQV5 615 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 C15orf39Q6ZRI6 1047 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 NANOGP1Q8N7R0 232 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 OR4S1Q8NGB4 309 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 OR5D13Q8NGL4 314 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 PHOSPHO2Q8TCD6 241 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 GPX7Q96SL4 187 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-201ENST00000302528 ST3GAL6Q9Y274 331 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 FZD6O60353 706 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 GJB3O75712 270 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 HOXD9P28356 352 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 RACK1P63244 317 aaKnown RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 CCDC88AQ3V6T2 1871 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 TMEM65Q6PI78 240 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 BTLAQ7Z6A9 289 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF429Q86V71 674 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF740Q8NDX6 193 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 RNF2Q99496 336 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 HSD17B10Q99714 261 aaKnown RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 NARFLQ9H6Q4 476 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 SIRT3Q9NTG7 399 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 RALYQ9UKM9 306 aaKnown RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF346Q9UL40 294 aaKnown RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 ZC3H12DA2A288 527 aaKnown RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 OR4E1P0C645 316 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 NID1P14543 1247 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 PPP1CAP62136 330 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 DEFB109BQ30KR1 87 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 GGNBP1Q5YKI7 109 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 CALHM3Q86XJ0 350 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 OR4D10Q8NGI6 311 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 CRYGNQ8WXF5 182 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 PELI1Q96FA3 418 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 IP6K3Q96PC2 410 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 HCFC2Q9Y5Z7 792 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 MASP2O00187 686 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 ACAA2P42765 397 aaKnown RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 DLX1P56177 255 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 SLC35E4Q6ICL7 350 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 FBXL14Q8N1E6 418 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 HGDQ93099 445 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 TMEM38AQ9H6F2 299 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 UBE2ZQ9H832 354 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 BET1LQ9NYM9 111 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 MKRN2OSH3BPM6 223 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 M0R1X1 148 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 CXCL13O43927 109 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 ALX3O95076 343 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 SDHAP31040 664 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 RPL30P62888 115 aaKnown RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 CTU2Q2VPK5 515 aaKnown RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 EMC4Q5J8M3 183 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 FAAP20Q6NZ36 180 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 TMEM99Q8N816 258 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 OR2A25A4D2G3 310 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 SPRY3O43610 288 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 TGFBR1P36897 503 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 GNG4P50150 75 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 NOVA1P51513 510 aaKnown RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 CLDN15P56746 228 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 TAS1R1Q7RTX1 841 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 NKAIN4Q8IVV8 208 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 KISS1RQ969F8 398 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 RPEQ96AT9 228 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 LYRM4Q9HD34 91 aa9.41□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF256Q9Y2P7 627 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-201ENST00000302528 A0A0A6YYJ9 748 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 GALR1P47211 349 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 VWA2Q5GFL6 755 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 OSR2Q8N2R0 312 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 OR13H1Q8NG92 308 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 LKAAEAR1Q8TD35 194 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 ADAT1Q9BUB4 502 aaKnown RBP9.4□□□□□ -0.9
CLIP1-201ENST00000302528 TJP1Q07157 1748 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 TMEM129A0AVI4 362 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 M0R143 59 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 TNFRSF1AP19438 455 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 ARRB2P32121 409 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 GUK1Q16774 197 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 LYG2Q86SG7 212 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 UBTD2Q8WUN7 234 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 FCN1O00602 326 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 CST7O76096 145 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 SRSF9Q13242 221 aaKnown RBP eCLIP9.4□□□□□ -0.9
CLIP1-201ENST00000302528 DUSP5Q16690 384 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 LYPD8Q6UX82 237 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 ABI3BPQ7Z7G0 1075 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 DYRK2Q92630 601 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 PBOV1Q9GZY1 135 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 KIF13AQ9H1H9 1805 aa9.4□□□□□ -0.9
CLIP1-201ENST00000302528 SLC22A20A6NK97 555 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 GCGP01275 180 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 HIST1H1CP16403 213 aaKnown RBP9.4□□□□□ -0.91
CLIP1-201ENST00000302528 MGMTP16455 207 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 CD27P26842 260 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 OR3A1P47881 315 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 RPL29P47914 159 aaKnown RBP9.4□□□□□ -0.91
CLIP1-201ENST00000302528 NUMA1Q14980 2115 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 HSF5Q4G112 596 aaPredicted RBP9.4□□□□□ -0.91
CLIP1-201ENST00000302528 TEX261Q6UWH6 196 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms