RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 PAX8Q06710 450 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 MALLQ13021 153 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 ZNF154Q13106 437 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 KPNB1Q14974 876 aaKnown RBP9.39□□□□□ -0.91
CLCC1-201ENST00000302500 SNAPC1Q16533 368 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 SSX6Q7RTT6 188 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 MRPL21Q7Z2W9 205 aaKnown RBP9.39□□□□□ -0.91
CLCC1-201ENST00000302500 KLBQ86Z14 1044 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 ZDHHC13Q8IUH4 622 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 OR52H1Q8NGJ2 320 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 PYDC1Q8WXC3 89 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 TIMD4Q96H15 378 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 REEP6Q96HR9 211 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 OR8B4Q96RC9 309 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 GAL3ST1Q99999 423 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 ADAT1Q9BUB4 502 aaKnown RBP9.39□□□□□ -0.91
CLCC1-201ENST00000302500 SLC22A4Q9H015 551 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 KRT84Q9NSB2 600 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 INSIG2Q9Y5U4 225 aa9.39□□□□□ -0.91
CLCC1-201ENST00000302500 A0A0U1RQV5 110 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 DLGAP1O14490 977 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 ZNF205O95201 554 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 SBK2P0C263 348 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 FCGR1AP12314 374 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 GABRB1P18505 474 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 GATA3P23771 443 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 DDOSTP39656 456 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 SLC15A1P46059 708 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 LCN2P80188 198 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 MFGE8Q08431 387 aaPredicted RBP9.38□□□□□ -0.91
CLCC1-201ENST00000302500 TEX36Q5VZQ5 186 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 ZNF826PQ6ZT77 177 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 FAM57BQ71RH2 274 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 MEPCEQ7L2J0 689 aaKnown RBP9.38□□□□□ -0.91
CLCC1-201ENST00000302500 SPICQ8N5J4 248 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 PPP1R14AQ96A00 147 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 SEMA6AQ9H2E6 1030 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 RGCCQ9H4X1 137 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 LRCH1Q9Y2L9 728 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 RHBDD3Q9Y3P4 386 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 DSCAML1Q8TD84 2053 aa9.38□□□□□ -0.91
CLCC1-201ENST00000302500 A0A1B0GTI1 187 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 C22orf46C9J442 243 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 VENTXO95231 258 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 CST4P01036 141 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 IFNA2P01563 188 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 TTRP02766 147 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 ANPEPP15144 967 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 ADRA2CP18825 462 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 CD80P33681 288 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 SLC25A30Q5SVS4 291 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 TMEM42Q69YG0 159 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 WDR82Q6UXN9 313 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 FAM90A1Q86YD7 464 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 ZNF679Q8IYX0 411 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 MUC20Q8N307 709 aaPredicted RBP9.37□□□□□ -0.91
CLCC1-201ENST00000302500 TCEANCQ8N8B7 351 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 C19orf18Q8NEA5 215 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 SPRYD4Q8WW59 207 aaPredicted RBP9.37□□□□□ -0.91
CLCC1-201ENST00000302500 UBE2FQ969M7 185 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 HRASLS5Q96KN8 279 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 C1orf147Q96MC9 270 aaPredicted RBP9.37□□□□□ -0.91
CLCC1-201ENST00000302500 MBOAT4Q96T53 435 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 ZNF649Q9BS31 505 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 NIPAL2Q9H841 368 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 SMURF1Q9HCE7 757 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 ESM1Q9NQ30 184 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 DNAJC27Q9NZQ0 273 aa9.37□□□□□ -0.91
CLCC1-201ENST00000302500 NUFIP1Q9UHK0 495 aaKnown RBP9.37□□□□□ -0.91
CLCC1-201ENST00000302500 MRM2Q9UI43 246 aaKnown RBP9.37□□□□□ -0.91
CLCC1-201ENST00000302500 A0A0G2JMP0 313 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 A0A0X1KG70 313 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 A0A1B0GW55 424 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 ACOD1A6NK06 481 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 PSMD9O00233 223 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 MAGEB4O15481 346 aaPredicted RBP9.36□□□□□ -0.91
CLCC1-201ENST00000302500 FOXH1O75593 365 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 APOC1P02654 83 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 MRPL3P09001 348 aaKnown RBP9.36□□□□□ -0.91
CLCC1-201ENST00000302500 H2BFMP0C1H6 154 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 DUX4L2P0CJ85 424 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 DUX4L3P0CJ86 424 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 DUX4L4P0CJ87 422 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 DUX4L5P0CJ88 424 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 DUX4L6P0CJ89 424 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 DUX4L7P0CJ90 424 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 PPIAL4GP0DN37 164 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 MMP9P14780 707 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 HNF1AP20823 631 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 PCMT1P22061 227 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 CCL1P22362 96 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 CSNK2BP67870 215 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 ELF3P78545 371 aaPredicted RBP9.36□□□□□ -0.91
CLCC1-201ENST00000302500 OR8G1Q15617 311 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 DUX4L9Q6RFH8 374 aaPredicted RBP9.36□□□□□ -0.91
CLCC1-201ENST00000302500 DCDC5Q6ZRR9 648 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 USP43Q70EL4 1123 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 GALNT4Q8N4A0 578 aa9.36□□□□□ -0.91
CLCC1-201ENST00000302500 KLHL36Q8N4N3 616 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms