RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 SFRP5Q5T4F7 317 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 PAQR4Q8N4S7 273 aaPredicted RBP18.66■□□□□ 0.58
SOX17-201ENST00000297316 OR14K1Q8NGZ2 314 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 C12orf49Q9H741 205 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 ING3Q9NXR8 418 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 BSNQ9UPA5 3926 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 H7C417 338 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 ALX3O95076 343 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 IGHG3P01860 377 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 C1QBP02746 253 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 UNC119Q13432 240 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 BTN2A1Q7KYR7 527 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 GON7Q9BXV9 100 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 GHITMQ9H3K2 345 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 METTL17Q9H7H0 456 aaPredicted RBP18.65■□□□□ 0.58
SOX17-201ENST00000297316 BEX1Q9HBH7 125 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 NKIRAS2Q9NYR9 191 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 MTFP1Q9UDX5 166 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 WIPF3A6NGB9 483 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 TPPPO94811 219 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 CST2P09228 141 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 HGFACQ04756 655 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 OLFML2AQ68BL7 652 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 DOK3Q7L591 496 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 MCEMP1Q8IX19 187 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 ZADH2Q8N4Q0 377 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 C15orf40Q8WUR7 153 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 FOXRED1Q96CU9 486 aaPredicted RBP18.65■□□□□ 0.58
SOX17-201ENST00000297316 WASF3Q9UPY6 502 aa18.65■□□□□ 0.58
SOX17-201ENST00000297316 A0A096LPE4 126 aa18.64■□□□□ 0.57
SOX17-201ENST00000297316 A0A1W2PPZ6 126 aa18.64■□□□□ 0.57
SOX17-201ENST00000297316 C7orf66A4D0T2 115 aa18.64■□□□□ 0.57
SOX17-201ENST00000297316 SLC22A20A6NK97 555 aa18.64■□□□□ 0.57
SOX17-201ENST00000297316 ZNF724A8MTY0 619 aa18.64■□□□□ 0.57
SOX17-201ENST00000297316 SMLR1H3BR10 107 aa18.64■□□□□ 0.57
SOX17-201ENST00000297316 SGCEO43556 437 aa18.64■□□□□ 0.57
SOX17-201ENST00000297316 ARF1P84077 181 aaKnown RBP18.64■□□□□ 0.57
SOX17-201ENST00000297316 GTF3C1Q12789 2109 aa18.64■□□□□ 0.57
SOX17-201ENST00000297316 MYO7BQ6PIF6 2116 aa18.64■□□□□ 0.57
SOX17-201ENST00000297316 ZNF627Q7L945 461 aa18.64■□□□□ 0.57
SOX17-201ENST00000297316 C20orf85Q9H1P6 137 aa18.64■□□□□ 0.57
SOX17-201ENST00000297316 ZMAT3Q9HA38 289 aaKnown RBP18.64■□□□□ 0.57
SOX17-201ENST00000297316 PARPBPQ9NWS1 579 aa18.64■□□□□ 0.57
SOX17-201ENST00000297316 M0R135 149 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 ZNF780AO75290 641 aaPredicted RBP18.63■□□□□ 0.57
SOX17-201ENST00000297316 H2AFB2P0C5Z0 115 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 AP3S2P59780 193 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 QRFPP83859 136 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 PSG4Q00888 419 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 PMPCAQ10713 525 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 TNK1Q13470 666 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 RNPS1Q15287 305 aaKnown RBP18.63■□□□□ 0.57
SOX17-201ENST00000297316 PCGF3Q3KNV8 242 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 SNAI3Q3KNW1 292 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 SLC16A14Q7RTX9 510 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 OR5M9Q8NGP3 310 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 AKAP1Q92667 903 aaKnown RBP eCLIP18.63■□□□□ 0.57
SOX17-201ENST00000297316 PHF21AQ96BD5 680 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 ZNF799Q96GE5 643 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 MS4A3Q96HJ5 214 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 LUZP4Q9P127 313 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 COPZ2Q9P299 210 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 PRSS50Q9UI38 385 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 IGKV1-9A0A0C4DH69 117 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 SYNGR3O43761 229 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 DHFRP00374 187 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 CRYGSP22914 178 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 ZNF169Q14929 603 aaPredicted RBP18.63■□□□□ 0.57
SOX17-201ENST00000297316 GSG1Q2KHT4 349 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 ACBD4Q8NC06 268 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 BEST4Q8NFU0 473 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 OR4D10Q8NGI6 311 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 FAM46BQ96A09 425 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 APH1AQ96BI3 265 aa18.63■□□□□ 0.57
SOX17-201ENST00000297316 RBBP9O75884 186 aa18.62■□□□□ 0.57
SOX17-201ENST00000297316 VSIG8P0DPA2 414 aa18.62■□□□□ 0.57
SOX17-201ENST00000297316 EIF2S3P41091 472 aaKnown RBP18.62■□□□□ 0.57
SOX17-201ENST00000297316 FCN2Q15485 313 aa18.62■□□□□ 0.57
SOX17-201ENST00000297316 LINC00303Q3SY05 128 aa18.62■□□□□ 0.57
SOX17-201ENST00000297316 LINC00470Q9BZP3 86 aa18.62■□□□□ 0.57
SOX17-201ENST00000297316 DSPP15924 2871 aaKnown RBP18.62■□□□□ 0.57
SOX17-201ENST00000297316 ZNF93P35789 620 aaPredicted RBP18.62■□□□□ 0.57
SOX17-201ENST00000297316 RTN4RL2Q86UN3 420 aa18.62■□□□□ 0.57
SOX17-201ENST00000297316 GIMAP1Q8WWP7 306 aa18.62■□□□□ 0.57
SOX17-201ENST00000297316 CMBLQ96DG6 245 aa18.62■□□□□ 0.57
SOX17-201ENST00000297316 UQCC2Q9BRT2 126 aa18.62■□□□□ 0.57
SOX17-201ENST00000297316 WNT5BQ9H1J7 359 aa18.62■□□□□ 0.57
SOX17-201ENST00000297316 ZNF224Q9NZL3 707 aa18.62■□□□□ 0.57
SOX17-201ENST00000297316 AKR7A2O43488 359 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 AGTR1P30556 359 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 PRSS3P35030 304 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 SNRPD2P62316 118 aaKnown RBP18.61■□□□□ 0.57
SOX17-201ENST00000297316 MAB21L1Q13394 359 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 RAB35Q15286 201 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 ZNF100Q8IYN0 542 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 GPX8Q8TED1 209 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 DEDD2Q8WXF8 326 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 PRDM14Q9GZV8 571 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 OR10A4Q9H209 315 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 RNF122Q9H9V4 155 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms