RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 EPHA2P29317 976 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 DOC2BQ14184 412 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 SLC38A9Q8NBW4 561 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 PCED1AQ9H1Q7 454 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 THAP10Q9P2Z0 257 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-201ENST00000295550 RALYQ9UKM9 306 aaKnown RBP8.96□□□□□ -0.98
COL6A3-201ENST00000295550 K7ESM1 405 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 TGFBR1P36897 503 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 TBC1D28Q2M2D7 210 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 CCDC190Q86UF4 302 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 GJC3Q8NFK1 279 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 OR10G3Q8NGC4 313 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 SLC23A1Q9UHI7 598 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 M0R143 59 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 HOXC11O43248 304 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-201ENST00000295550 COX7A2P2O60397 106 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 BSGP35613 385 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 FAAP20Q6NZ36 180 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 AAED1Q7RTV5 226 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 OR2M3Q8NG83 312 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 ZNF775Q96BV0 537 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-201ENST00000295550 MS4A6EQ96DS6 147 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 CIB3Q96Q77 187 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-201ENST00000295550 TAAR9Q96RI9 348 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 ZDHHC5Q9C0B5 715 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 RHOFQ9HBH0 211 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 OBP2AQ9NY56 170 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 BET1LQ9NYM9 111 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 KIAA1456Q9P272 454 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 NEU3Q9UQ49 428 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 IGLV3-16A0A075B6K0 115 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 A0A1W2PPH5 198 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 CTXN2P0C2S0 81 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 GLCCI1Q86VQ1 547 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 GABRG1Q8N1C3 465 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 SCCPDHQ8NBX0 429 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 WBP2Q969T9 261 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 CD46P15529 392 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 GNG4P50150 75 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 LGALS4P56470 323 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 ZNF66Q6ZN08 573 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 TSEN54Q7Z6J9 526 aaKnown RBP8.96□□□□□ -0.98
COL6A3-201ENST00000295550 OR2AK2Q8NG84 335 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 FAM174AQ8TBP5 190 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 PHYHIPLQ96FC7 376 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 DLL4Q9NR61 685 aa8.96□□□□□ -0.98
COL6A3-201ENST00000295550 NOSIPQ9Y314 301 aaKnown RBP8.96□□□□□ -0.98
COL6A3-201ENST00000295550 NSG1A0A0A6YYJ2 146 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 SNRPGP15A8MWD9 76 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 GPM6AP51674 278 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 UBE2MP61081 183 aaKnown RBP8.95□□□□□ -0.98
COL6A3-201ENST00000295550 MANEAQ5SRI9 462 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 BATF2Q8N1L9 274 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 ZNF511Q8NB15 262 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 ZFPM2Q8WW38 1151 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 RHNO1Q9BSD3 238 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 A0A1B0GWA3 101 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 CLEC12BQ2HXU8 276 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 OR51F2Q8NH61 342 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 SOWAHCQ53LP3 525 aaPredicted RBP8.95□□□□□ -0.98
COL6A3-201ENST00000295550 LYG2Q86SG7 212 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 MISPQ8IVT2 679 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 HHIPQ96QV1 700 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 TRIB1Q96RU8 372 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 GSX1Q9H4S2 264 aaPredicted RBP8.95□□□□□ -0.98
COL6A3-201ENST00000295550 ADAM11O75078 769 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 CD14P08571 375 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 CST9Q5W186 159 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 ATF6BQ99941 703 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 MAGT1Q9H0U3 335 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 KCNE1BA0A087WTH5 132 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 RNASEK-C17orf49H0YIS7 233 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 ETHE1O95571 254 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 POU3F3P20264 500 aaPredicted RBP8.95□□□□□ -0.98
COL6A3-201ENST00000295550 ACHEP22303 614 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 PPOXP50336 477 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 RPEL1Q2QD12 228 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 ZNF573Q86YE8 665 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 TMED7-TICAM2A0A0A6YYA0 188 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 FBP1P09467 338 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 ZNF17P17021 662 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 GJA4P35212 333 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 BHLHE23Q8NDY6 225 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 TMED7Q9Y3B3 224 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 NID1P14543 1247 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 TEAD1P28347 426 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 RPL29P47914 159 aaKnown RBP8.95□□□□□ -0.98
COL6A3-201ENST00000295550 YPEL5P62699 121 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 OR8G1Q15617 311 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 MIDNQ504T8 468 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 MED25Q71SY5 747 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 BCL7CQ8WUZ0 217 aaPredicted RBP8.95□□□□□ -0.98
COL6A3-201ENST00000295550 LRIT1Q9P2V4 623 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 PIGPP57054 158 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 C19orf47Q8N9M1 422 aaKnown RBP8.95□□□□□ -0.98
COL6A3-201ENST00000295550 NAT8BQ9UHF3 227 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 ZNF835Q9Y2P0 537 aa8.95□□□□□ -0.98
COL6A3-201ENST00000295550 A6NDN8 102 aa8.94□□□□□ -0.98
COL6A3-201ENST00000295550 BCAT2O15382 392 aaPredicted RBP8.94□□□□□ -0.98
COL6A3-201ENST00000295550 PRSS36Q5K4E3 855 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms