RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 PLCE1Q9P212 2302 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 OR4C45A6NMZ5 311 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 OGG1O15527 345 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 ZFPL1O95159 310 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 APOC1P02654 83 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 LOXP28300 417 aaPredicted RBP13.05□□□□□ -0.32
CCDC140-201ENST00000295226 MAGEB1P43366 347 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 CDK5R1Q15078 307 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 BEX5Q5H9J7 111 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 FDX2Q6P4F2 183 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 RPL22L1Q6P5R6 122 aaKnown RBP13.05□□□□□ -0.32
CCDC140-201ENST00000295226 SSX8Q7RTT4 187 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 EGFL6Q8IUX8 553 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 ACBD4Q8NC06 268 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 OR1J1Q8NGS3 322 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 OR10AC1Q8NH08 325 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 OR51E1Q8TCB6 317 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 FAM222BQ8WU58 562 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 LYZL4Q96KX0 146 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 DCLRE1CQ96SD1 692 aaKnown RBP13.05□□□□□ -0.32
CCDC140-201ENST00000295226 ABCB10Q9NRK6 738 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 CMAHPQ9Y471 501 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 LRBAP50851 2863 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 SHISA9B4DS77 424 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 CTDSP2O14595 271 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 CD3EP07766 207 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 TNFSF8P32971 234 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 TGM4P49221 684 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 PPP1CBP62140 327 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 FABP5Q01469 135 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 ZNF92Q03936 586 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 SNTB2Q13425 540 aaKnown RBP13.04□□□□□ -0.32
CCDC140-201ENST00000295226 MSMPQ1L6U9 139 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 DDI2Q5TDH0 399 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 CRYBG3Q68DQ2 2970 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 DMKNQ6E0U4 476 aaPredicted RBP13.04□□□□□ -0.32
CCDC140-201ENST00000295226 ELMOD2Q8IZ81 293 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 OR13C5Q8NGS8 318 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 SETD6Q8TBK2 473 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 GHSRQ92847 366 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 TMEM203Q969S6 136 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 APOBEC3DQ96AK3 386 aaPredicted RBP13.04□□□□□ -0.32
CCDC140-201ENST00000295226 BARHL1Q9BZE3 327 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 OR2J1Q9GZK6 312 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 OR10A2Q9H208 303 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 NUFIP1Q9UHK0 495 aaKnown RBP13.04□□□□□ -0.32
CCDC140-201ENST00000295226 ATP23Q9Y6H3 246 aa13.04□□□□□ -0.32
CCDC140-201ENST00000295226 HRNRQ86YZ3 2850 aaPredicted RBP13.04□□□□□ -0.32
CCDC140-201ENST00000295226 RGS5O15539 181 aa13.03□□□□□ -0.32
CCDC140-201ENST00000295226 RGS9O75916 674 aaPredicted RBP13.03□□□□□ -0.32
CCDC140-201ENST00000295226 APOA1P02647 267 aa13.03□□□□□ -0.32
CCDC140-201ENST00000295226 HNRNPCP07910 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC140-201ENST00000295226 INSL4Q14641 139 aa13.03□□□□□ -0.32
CCDC140-201ENST00000295226 CCDC58Q4VC31 144 aa13.03□□□□□ -0.32
CCDC140-201ENST00000295226 COMMD2Q86X83 199 aa13.03□□□□□ -0.32
CCDC140-201ENST00000295226 ZNF676Q8N7Q3 588 aa13.03□□□□□ -0.32
CCDC140-201ENST00000295226 OR51A4Q8NGJ6 313 aa13.03□□□□□ -0.32
CCDC140-201ENST00000295226 SLC25A40Q8TBP6 338 aa13.03□□□□□ -0.32
CCDC140-201ENST00000295226 GPR84Q9NQS5 396 aa13.03□□□□□ -0.32
CCDC140-201ENST00000295226 POU2F3Q9UKI9 436 aa13.03□□□□□ -0.32
CCDC140-201ENST00000295226 A6NIN4 97 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 GABRPO00591 440 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 PLPP2O43688 288 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 LMX1BO60663 402 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 PTBP1P26599 531 aaKnown RBP eCLIP13.02□□□□□ -0.32
CCDC140-201ENST00000295226 SDC2P34741 201 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 THBS4P35443 961 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 RAD52P43351 418 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 FABP6P51161 128 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 PPP3R1P63098 170 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 NKX6-1P78426 367 aaPredicted RBP13.02□□□□□ -0.32
CCDC140-201ENST00000295226 HNRNPA0Q13151 305 aaKnown RBP13.02□□□□□ -0.32
CCDC140-201ENST00000295226 TMEM255AQ5JRV8 349 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 HIST2H2BCQ6DN03 193 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 MZT2AQ6P582 158 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 OR52H1Q8NGJ2 320 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 OR5AK2Q8NH90 309 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 LILRB1Q8NHL6 650 aaPredicted RBP13.02□□□□□ -0.32
CCDC140-201ENST00000295226 RPS4Y2Q8TD47 263 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 HAVCR2Q8TDQ0 301 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 ACOT12Q8WYK0 555 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 RGP1Q92546 391 aaPredicted RBP13.02□□□□□ -0.32
CCDC140-201ENST00000295226 SMIM19Q96E16 107 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 REEP6Q96HR9 211 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 FAM71F1Q96KD3 344 aaPredicted RBP13.02□□□□□ -0.32
CCDC140-201ENST00000295226 PGLYRP3Q96LB9 341 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 TMED9Q9BVK6 235 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 RHBDL2Q9NX52 303 aa13.02□□□□□ -0.32
CCDC140-201ENST00000295226 A0A1B0GTI1 187 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 A0A1W2PPR1 153 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 ACOD1A6NK06 481 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 SERPINA3P01011 423 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 CD1AP06126 327 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 MPV17P39210 176 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 MTNR1BP49286 362 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 CCR9P51686 369 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 MRPL28Q13084 256 aaKnown RBP13.02□□□□□ -0.33
CCDC140-201ENST00000295226 GK2Q14410 553 aaPredicted RBP13.02□□□□□ -0.33
CCDC140-201ENST00000295226 STEAP3Q658P3 488 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 METAP1DQ6UB28 335 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms