RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 ALOX5APP20292 161 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 NAA10P41227 235 aaPredicted RBP13.18□□□□□ -0.3
UBXN1-201ENST00000294119 ACTA2P62736 377 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 ACTG2P63267 376 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 TUBA4AP68366 448 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 MVKQ03426 396 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 EGR3Q06889 387 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 SCRN3Q0VDG4 424 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 GALEQ14376 348 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 TAF9Q16594 264 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 SLC36A2Q495M3 483 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 DEGS2Q6QHC5 323 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 TMPRSS11AQ6ZMR5 421 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 PLEKHG7Q6ZR37 379 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 SPATC1Q76KD6 591 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 SLC16A14Q7RTX9 510 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 DPY19L4Q7Z388 723 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 CCDC90BQ9GZT6 254 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 C1orf198Q9H425 327 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 PAK1IP1Q9NWT1 392 aaPredicted RBP13.18□□□□□ -0.3
UBXN1-201ENST00000294119 ERVK-18Q9QC07 812 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 CAB39Q9Y376 341 aaPredicted RBP13.18□□□□□ -0.3
UBXN1-201ENST00000294119 TIMM10BQ9Y5J6 103 aa13.18□□□□□ -0.3
UBXN1-201ENST00000294119 PLXNB1O43157 2135 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 SULT1C4O75897 302 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 UBL3O95164 117 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 NDUFA7O95182 113 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 RPSAP08865 295 aaKnown RBP13.17□□□□□ -0.3
UBXN1-201ENST00000294119 SPARCP09486 303 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 B4GALT1P15291 398 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 ECH1Q13011 328 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 MRPL28Q13084 256 aaKnown RBP13.17□□□□□ -0.3
UBXN1-201ENST00000294119 ENDOGQ14249 297 aaKnown RBP13.17□□□□□ -0.3
UBXN1-201ENST00000294119 TMEM53Q6P2H8 277 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 C9orf139Q6ZV77 190 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 OR4F5Q8NH21 305 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 FCGR1BQ92637 280 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 MND1Q9BWT6 205 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 NOX3Q9HBY0 568 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 ERVK13-1Q9NX77 482 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 ATPIF1Q9UII2 106 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 CMAHPQ9Y471 501 aa13.17□□□□□ -0.3
UBXN1-201ENST00000294119 A0A1W2PQL4 384 aaPredicted RBP13.16□□□□□ -0.3
UBXN1-201ENST00000294119 CLPSL1A2RUU4 121 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 ZNF254O75437 659 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 GPANK1O95872 356 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 SCG5P05408 212 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 C21orf33P30042 268 aaPredicted RBP13.16□□□□□ -0.3
UBXN1-201ENST00000294119 RAG2P55895 527 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 LOXL3P58215 753 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 TUBA1BP68363 451 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 HIST1H3AP68431 136 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 ROM1Q03395 351 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 SNTB2Q13425 540 aaKnown RBP13.16□□□□□ -0.3
UBXN1-201ENST00000294119 EIF2B1Q14232 305 aaKnown RBP13.16□□□□□ -0.3
UBXN1-201ENST00000294119 IRF3Q14653 427 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 HLXQ14774 488 aaPredicted RBP13.16□□□□□ -0.3
UBXN1-201ENST00000294119 TBCEQ15813 527 aaPredicted RBP13.16□□□□□ -0.3
UBXN1-201ENST00000294119 MEP1BQ16820 701 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 GSG1Q2KHT4 349 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 HIST2H3PS2Q5TEC6 136 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 ZNF322Q6U7Q0 402 aaPredicted RBP13.16□□□□□ -0.3
UBXN1-201ENST00000294119 LYPD4Q6UWN0 246 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 HIST2H3AQ71DI3 136 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 TUBA1AQ71U36 451 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 ALDH16A1Q8IZ83 802 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 SYS1Q8N2H4 156 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 KLHL36Q8N4N3 616 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 OR52N1Q8NH53 320 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 THEM6Q8WUY1 208 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 SNX33Q8WV41 574 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 MRPS26Q9BYN8 205 aaKnown RBP13.16□□□□□ -0.3
UBXN1-201ENST00000294119 NIPAL2Q9H841 368 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 EMC7Q9NPA0 242 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 B3GNT2Q9NY97 397 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 ASH2LQ9UBL3 628 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 SCOCQ9UIL1 159 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 LHFPL6Q9Y693 200 aa13.16□□□□□ -0.3
UBXN1-201ENST00000294119 TRIM64CA6NLI5 447 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 MYL12BO14950 172 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 CLPXO76031 633 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 APOL3O95236 402 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 PTHP01270 115 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 APOC1P02654 83 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 MT-ND2P03891 347 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 KRT8P05787 483 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 LIMS3P0CW19 117 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 LIMS4P0CW20 117 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 NR4A1P22736 598 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 ALDH3B1P43353 468 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 DBPQ10586 325 aaPredicted RBP13.15□□□□□ -0.3
UBXN1-201ENST00000294119 AVPI1Q5T686 147 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 DCXRQ7Z4W1 244 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.15□□□□□ -0.3
UBXN1-201ENST00000294119 LHFPL3Q86UP9 236 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 SKA3Q8IX90 412 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 ZNF679Q8IYX0 411 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 SPARTQ8N0X7 666 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 LRRC18Q8N456 261 aa13.15□□□□□ -0.3
UBXN1-201ENST00000294119 NANOGP1Q8N7R0 232 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms