RNA–Protein interactions for RNA: ENST00000291535.11

UBASH3A-201, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3A, Length 2,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-201ENST00000291535 PARP11Q9NR21 331 aa10.78□□□□□ -0.68
UBASH3A-201ENST00000291535 SMCO4Q9NRQ5 59 aa10.78□□□□□ -0.68
UBASH3A-201ENST00000291535 CENPMQ9NSP4 180 aa10.78□□□□□ -0.68
UBASH3A-201ENST00000291535 C5orf52A6NGY3 159 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 B4DGG1 531 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 CDC14BO60729 498 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 SMIM6P0DI80 62 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 HKR1P10072 659 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 FOSL2P15408 326 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 FASLGP48023 281 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 SPEM2Q0P670 501 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 PLCXD2Q0VAA5 305 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 RAB32Q13637 225 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 SLC9A3R2Q15599 337 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 SMAD2Q15796 467 aaKnown RBP10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 RPL7L1Q6DKI1 246 aaKnown RBP10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 EIF5AL1Q6IS14 154 aaKnown RBP10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 DHRS11Q6UWP2 260 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 COX15Q7KZN9 410 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 SLC29A4Q7RTT9 530 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 C15orf54Q8N8G6 183 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 ZNF248Q8NDW4 579 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 OR13G1Q8NGZ3 307 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 MFSD8Q8NHS3 518 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 MAFAQ8NHW3 353 aaPredicted RBP10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 C11orf40Q8WZ69 217 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 ZNF576Q9H609 170 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 UCK1Q9HA47 277 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 PRR13Q9NZ81 148 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 CACFD1Q9UGQ2 172 aa10.77□□□□□ -0.68
UBASH3A-201ENST00000291535 PHF3Q92576 2039 aaKnown RBP10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 FIGNL2A6NMB9 653 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 FOXI3A8MTJ6 420 aaPredicted RBP10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 NPIPA5E9PKD4 350 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 FARS2O95363 451 aaKnown RBP10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 PET100P0DJ07 73 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 ZNF17P17021 662 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 BCKDHBP21953 392 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 P2RY4P51582 365 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 SWI5Q1ZZU3 235 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 RNF212Q495C1 297 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 GLIPR1L1Q6UWM5 242 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 H1FNTQ75WM6 255 aaPredicted RBP10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 ZFP82Q8N141 532 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 FAM89BQ8N5H3 189 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 KDF1Q8NAX2 398 aaPredicted RBP10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 KCNG3Q8TAE7 436 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 CYYR1Q96J86 154 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 LRRC61Q9BV99 259 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 TAF9BQ9HBM6 251 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 FANCFQ9NPI8 374 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 PISDQ9UG56 409 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 NPIPA1Q9UND3 350 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 MRPS28Q9Y2Q9 187 aaKnown RBP10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 PRUNE2Q8WUY3 3088 aa10.77□□□□□ -0.69
UBASH3A-201ENST00000291535 VCANP13611 3396 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 TDRD6O60522 2096 aaKnown RBP10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 IGHV5-51A0A0C4DH38 117 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 UBE2CO00762 179 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 GAPDHP04406 335 aaKnown RBP10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 CTSEP14091 401 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 GABRG2P18507 467 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 PTAFRP25105 342 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 ZNF84P51523 738 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 DVL1P1P54792 670 aaPredicted RBP10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 UCP2P55851 309 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 RAB5BP61020 215 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 MRPS21P82921 87 aaKnown RBP10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 HSF1Q00613 529 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 CPNE2Q96FN4 548 aaPredicted RBP10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 SCRT1Q9BWW7 348 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 NKX2-4Q9H2Z4 354 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 SEBOXQ9HB31 216 aaPredicted RBP10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 OR2S2Q9NQN1 319 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 DHCR7Q9UBM7 475 aaKnown RBP10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 THADAQ6YHU6 1953 aa10.76□□□□□ -0.69
UBASH3A-201ENST00000291535 ZNF354AO60765 605 aaPredicted RBP10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 MED6O75586 246 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 CST4P01036 141 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 S100A8P05109 93 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 THEGLP0DJG4 465 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 ZNF44P15621 663 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 ZNF708P17019 499 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 RCC1P18754 421 aaPredicted RBP10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 PI3P19957 117 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 AGAP20933 346 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 CCL1P22362 96 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 PMELP40967 661 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 CCR5P51681 352 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 F2RL1P55085 397 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 SNRPEP62304 92 aaKnown RBP10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 HLA-DQA1Q5Y7H0 255 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 KLHL24Q6TFL4 600 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 ZNF101Q8IZC7 436 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 OR1N1Q8NGS0 311 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 OR5H2Q8NGV7 314 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 OR51E1Q8TCB6 317 aa10.75□□□□□ -0.69
UBASH3A-201ENST00000291535 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms