RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 DEFA6Q01524 100 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 POU4F2Q12837 409 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 PPP1R8Q12972 351 aaKnown RBP10.57□□□□□ -0.72
CD44-203ENST00000278386 EIF2B1Q14232 305 aaKnown RBP10.57□□□□□ -0.72
CD44-203ENST00000278386 PDCD1Q15116 288 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 PCK2Q16822 640 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 OLFML2AQ68BL7 652 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 BTN2A1Q7KYR7 527 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 PDZD9Q8IXQ8 264 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 TMEM86BQ8N661 226 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 OR2T33Q8NG76 320 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 OR6N2Q8NGY6 317 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 LRRC29Q8WV35 223 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 SSMEM1Q8WWF3 244 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 OTULINQ96BN8 352 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 FAM71F1Q96KD3 344 aaPredicted RBP10.57□□□□□ -0.72
CD44-203ENST00000278386 TRIM15Q9C019 465 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 PRDM13Q9H4Q3 707 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 ACOXLQ9NUZ1 547 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 ARL8BQ9NVJ2 186 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 IL20Q9NYY1 176 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 ONECUT1Q9UBC0 465 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 IGHV1-69DA0A0B4J2H0 117 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 DHRS12A0PJE2 317 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 RIIAD1A6NNX1 92 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 ZNF593O00488 134 aaPredicted RBP10.56□□□□□ -0.72
CD44-203ENST00000278386 TNFRSF13BO14836 293 aaPredicted RBP10.56□□□□□ -0.72
CD44-203ENST00000278386 GASTP01350 101 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 IGHV1-69P01742 117 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 GNALP38405 381 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 SLC15A1P46059 708 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 ARF6P62330 175 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 SRSF4Q08170 494 aaKnown RBP10.56□□□□□ -0.72
CD44-203ENST00000278386 MICBQ29980 383 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 DPY19L4Q7Z388 723 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 ERI1Q8IV48 349 aaKnown RBP10.56□□□□□ -0.72
CD44-203ENST00000278386 OR4Q3Q8NH05 313 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 TBC1D15Q8TC07 691 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 REEP6Q96HR9 211 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 CCT8L2Q96SF2 557 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 DDOQ99489 341 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 PAPOLGQ9BWT3 736 aaKnown RBP10.56□□□□□ -0.72
CD44-203ENST00000278386 SIRPDQ9H106 197 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 BRD7Q9NPI1 651 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 C1RLQ9NZP8 487 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 BAIAP2Q9UQB8 552 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 POMT1Q9Y6A1 747 aa10.56□□□□□ -0.72
CD44-203ENST00000278386 A0A1B0GW55 424 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 DCTN3O75935 186 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 NDUFA7O95182 113 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 ECDO95905 644 aaPredicted RBP10.55□□□□□ -0.72
CD44-203ENST00000278386 DUX4L2P0CJ85 424 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 DUX4L3P0CJ86 424 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 DUX4L4P0CJ87 422 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 DUX4L5P0CJ88 424 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 DUX4L6P0CJ89 424 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 DUX4L7P0CJ90 424 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 DDOSTP39656 456 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 BLVRAP53004 296 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 SLC25A1P53007 311 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 CSNK2BP67870 215 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 RELBQ01201 579 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 SPATS1Q496A3 300 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 MIDNQ504T8 468 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 TEX36Q5VZQ5 186 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 ZNF770Q6IQ21 691 aaPredicted RBP10.55□□□□□ -0.72
CD44-203ENST00000278386 DUX4L9Q6RFH8 374 aaPredicted RBP10.55□□□□□ -0.72
CD44-203ENST00000278386 FAM57BQ71RH2 274 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 SLC16A9Q7RTY1 509 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 VMO1Q7Z5L0 202 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 TEX47Q8TBZ9 253 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 SPSB4Q96A44 273 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 PGAM5Q96HS1 289 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 INTS14Q96SY0 518 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 CCL13Q99616 98 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 TOR3AQ9H497 397 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 REEP1Q9H902 201 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 SP140LQ9H930 580 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 ACTR3BQ9P1U1 418 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 DUX4Q9UBX2 424 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 SAMHD1Q9Y3Z3 626 aaKnown RBP10.55□□□□□ -0.72
CD44-203ENST00000278386 U3KQV3 271 aa10.55□□□□□ -0.72
CD44-203ENST00000278386 A0A0U1RQK1 487 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 hCG_38984A0A1B0GV85 526 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 CLPSL1A2RUU4 121 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 GPR137BO60478 399 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 TIPRLO75663 272 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 IGHV4-59P01825 116 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 APOC1P02654 83 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 MAGEA2P43356 314 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 HMGA2P52926 109 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 ZNF121P58317 390 aaPredicted RBP10.54□□□□□ -0.72
CD44-203ENST00000278386 GMFBP60983 142 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 FAM3AP98173 230 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 IKZF1Q13422 519 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 PDLIM3Q53GG5 364 aaPredicted RBP10.54□□□□□ -0.72
CD44-203ENST00000278386 WDR38Q5JTN6 314 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 TEX30Q5JUR7 227 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 SLC36A1Q7Z2H8 476 aa10.54□□□□□ -0.72
CD44-203ENST00000278386 WDR86Q86TI4 376 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms