RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 H3BP45 60 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 LYZL6O75951 148 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 TSPAN12O95859 305 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 LRRC10Q5BKY1 277 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 HIST2H3AQ71DI3 136 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 CAMKMTQ7Z624 323 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 NT5CQ8TCD5 201 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 GALMQ96C23 342 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 FAM122AQ96E09 287 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 B9D1Q9UPM9 204 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 A0A087WUJ7 227 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 NDUFB3O43676 98 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 COX7A2P2O60397 106 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 CRYABP02511 175 aaKnown RBP10.7□□□□□ -0.7
SHPRH-201ENST00000275233 COL9A1P20849 921 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 CTGFP29279 349 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 GSG1Q2KHT4 349 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 BTLAQ7Z6A9 289 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 KMT5CQ86Y97 462 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 FAM26EQ8N5C1 309 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 TP53I13Q8NBR0 393 aaPredicted RBP10.7□□□□□ -0.7
SHPRH-201ENST00000275233 GPR32P1Q8NGA4 272 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 TMPRSS13Q9BYE2 586 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 VN1R1Q9GZP7 353 aa10.7□□□□□ -0.7
SHPRH-201ENST00000275233 A0A087WZY1 265 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 TERTO14746 1132 aaKnown RBP10.69□□□□□ -0.7
SHPRH-201ENST00000275233 RBP4P02753 201 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 PRSS12P56730 875 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 PPP1CAP62136 330 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 DHRS9Q9BPW9 319 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 ZNF785A8K8V0 405 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 MGMTP16455 207 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 POU3F3P20264 500 aaPredicted RBP10.69□□□□□ -0.7
SHPRH-201ENST00000275233 FGF7P21781 194 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 FMODQ06828 376 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 C17orf78Q8N4C9 275 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 AMER3Q8N944 861 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 NDUFB11Q9NX14 153 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 ADAMTSL3P82987 1691 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 TRGV10A0A0A0MS01 117 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 ADRA2CP18825 462 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 DLL4Q9NR61 685 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 STRAPQ9Y3F4 350 aaKnown RBP10.69□□□□□ -0.7
SHPRH-201ENST00000275233 CA6P23280 308 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 DBPQ10586 325 aaPredicted RBP10.69□□□□□ -0.7
SHPRH-201ENST00000275233 OR2T2Q6IF00 324 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 PRR7Q8TB68 274 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 LINC00615Q96LM1 132 aaPredicted RBP10.69□□□□□ -0.7
SHPRH-201ENST00000275233 RHNO1Q9BSD3 238 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 HDGFL3Q9Y3E1 203 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 ALG1L2C9J202 215 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 RRASP10301 218 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 SDHBP21912 280 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 ARRB2P32121 409 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 SRP14P37108 136 aaKnown RBP10.69□□□□□ -0.7
SHPRH-201ENST00000275233 SMIM21Q3B7S5 101 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 SLC25A35Q3KQZ1 300 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 PXDC1Q5TGL8 231 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 ADPRHL1Q8NDY3 354 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 RBPMSQ93062 196 aaKnown RBP10.69□□□□□ -0.7
SHPRH-201ENST00000275233 SMIM19Q96E16 107 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 MISP3Q96FF7 219 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 TAAR6Q96RI8 345 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 LRFN3Q9BTN0 628 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 JAM3Q9BX67 310 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 SLC35D1Q9NTN3 355 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 NPAP1Q9NZP6 1156 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 ZNF230Q9UIE0 474 aaPredicted RBP10.69□□□□□ -0.7
SHPRH-201ENST00000275233 TRIP6Q15654 476 aaKnown RBP10.69□□□□□ -0.7
SHPRH-201ENST00000275233 C3AR1Q16581 482 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 SPINK9Q5DT21 86 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 HES3Q5TGS1 186 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 SPINK14Q6IE38 97 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 TMED6Q8WW62 240 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 DERL3Q96Q80 235 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 LRP12Q9Y561 859 aa10.69□□□□□ -0.7
SHPRH-201ENST00000275233 OR2C1O95371 312 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 ZNF90Q03938 601 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 ANKRD37Q7Z713 158 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 PTOV1Q86YD1 416 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 DTWD2Q8NBA8 298 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 SLC39A7Q92504 469 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 NDFIP1Q9BT67 221 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 GABARAPL3Q9BY60 117 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 RAF1P04049 648 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 Q56UQ5 140 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 AVPI1Q5T686 147 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 C2CD4CQ8TF44 421 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 FBXO8Q9NRD0 319 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 UBE2L5PA0A1B0GUS4 154 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 GOSR1O95249 250 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 OR5H8P0DN80 308 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 HOXB3P14651 431 aaPredicted RBP10.68□□□□□ -0.7
SHPRH-201ENST00000275233 ZNF628Q5EBL2 1059 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 AKR1E2Q96JD6 320 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 RCL1Q9Y2P8 373 aaKnown RBP10.68□□□□□ -0.7
SHPRH-201ENST00000275233 TCRBV5S2A0A599 114 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 CYTIPO60759 359 aa10.68□□□□□ -0.7
SHPRH-201ENST00000275233 ZNF354AO60765 605 aaPredicted RBP10.68□□□□□ -0.7
SHPRH-201ENST00000275233 METTL15P1P0C7V9 234 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms