RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 SLC37A1P57057 533 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 IAH1Q2TAA2 248 aaPredicted RBP11.46□□□□□ -0.57
COL8A1-202ENST00000273342 C9orf50Q5SZB4 431 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 OR5H2Q8NGV7 314 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 AKR7LQ8NHP1 331 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 BSCL2Q96G97 398 aaPredicted RBP11.46□□□□□ -0.57
COL8A1-202ENST00000273342 WDR77Q9BQA1 342 aaPredicted RBP11.46□□□□□ -0.57
COL8A1-202ENST00000273342 EHFQ9NZC4 300 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 POLR1DQ9Y2S0 133 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 FBXO7Q9Y3I1 522 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 SFT2D2O95562 160 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 IL33O95760 270 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 TSPAN15O95858 294 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 CSTBP04080 98 aaKnown RBP11.46□□□□□ -0.57
COL8A1-202ENST00000273342 OR13C7P0DN81 318 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 NME1P15531 152 aaKnown RBP11.46□□□□□ -0.57
COL8A1-202ENST00000273342 CSNK2A1P68400 391 aaPredicted RBP11.46□□□□□ -0.57
COL8A1-202ENST00000273342 NAAAQ02083 359 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 SGCBQ16585 318 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 PRTGQ2VWP7 1150 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 ZNF704Q6ZNC4 412 aaPredicted RBP11.46□□□□□ -0.57
COL8A1-202ENST00000273342 ABHD12BQ7Z5M8 362 aaPredicted RBP11.46□□□□□ -0.57
COL8A1-202ENST00000273342 SLC22A24Q8N4F4 322 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 NAXEQ8NCW5 288 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 CSNK2A3Q8NEV1 391 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 ZNF285Q96NJ3 590 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 ADAM19Q9H013 955 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 DUSP15Q9H1R2 295 aaPredicted RBP11.46□□□□□ -0.57
COL8A1-202ENST00000273342 ZNF701Q9NV72 531 aaPredicted RBP11.46□□□□□ -0.57
COL8A1-202ENST00000273342 FBXL17Q9UF56 701 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 CACFD1Q9UGQ2 172 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 GPR132Q9UNW8 380 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 WDFY4Q6ZS81 3184 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 CLN5O75503 358 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 FCGR3AP08637 254 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 FSTP19883 344 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 HNRNPA2B1P22626 353 aaKnown RBP11.46□□□□□ -0.58
COL8A1-202ENST00000273342 CDAP32320 146 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 TOMM20Q15388 145 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 MIDNQ504T8 468 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 TMEM244Q5VVB8 128 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 CARD17Q5XLA6 110 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 SKA3Q8IX90 412 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 SLC22A8Q8TCC7 542 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 SMIM8Q96KF7 97 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 JSRP1Q96MG2 331 aaPredicted RBP11.46□□□□□ -0.58
COL8A1-202ENST00000273342 C5orf34Q96MH7 638 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 RTBDNQ9BSG5 229 aaPredicted RBP11.46□□□□□ -0.58
COL8A1-202ENST00000273342 TINAGQ9UJW2 476 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 MRPS28Q9Y2Q9 187 aaKnown RBP11.46□□□□□ -0.58
COL8A1-202ENST00000273342 SLCO1B1Q9Y6L6 691 aa11.46□□□□□ -0.58
COL8A1-202ENST00000273342 NPIPA5E9PKD4 350 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 NUDT21O43809 227 aaKnown RBP11.45□□□□□ -0.58
COL8A1-202ENST00000273342 YIF1AO95070 293 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 ZNF20P17024 532 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 ACKR3P25106 362 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 CFPP27918 469 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 FCGR2CP31995 323 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 TMEM50BP56557 158 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 SP6Q3SY56 376 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 PHF19Q5T6S3 580 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 SLC22A18ASQ8N1D0 253 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 ZNF248Q8NDW4 579 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 OR13G1Q8NGZ3 307 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 ST7LQ8TDW4 575 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 LPAR5Q9H1C0 372 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 WBP1LQ9NX94 342 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 VSX1Q9NZR4 365 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-202ENST00000273342 NPIPA1Q9UND3 350 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 UNC13CQ8NB66 2214 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 K7EPK0 472 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 PLPP3O14495 311 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 XRCC2O43543 280 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 AHSA1O95433 338 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 PRH1P02810 166 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 HEXAP06865 529 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 RPL12P30050 165 aaKnown RBP11.45□□□□□ -0.58
COL8A1-202ENST00000273342 P2RY4P51582 365 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 TMEM33P57088 247 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 HGFACQ04756 655 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 SPEM2Q0P670 501 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 PLCXD2Q0VAA5 305 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 HLA-DQA1Q5Y7H0 255 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 KLHL24Q6TFL4 600 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 C5orf46Q6UWT4 87 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 FAM71E2Q8N5Q1 922 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 SLAMF6Q96DU3 332 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 TGM7Q96PF1 710 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 CDC6Q99741 560 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 MESP1Q9BRJ9 268 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 PBOV1Q9GZY1 135 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 SLC26A1Q9H2B4 701 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 RCL1Q9Y2P8 373 aaKnown RBP11.45□□□□□ -0.58
COL8A1-202ENST00000273342 RHBDD3Q9Y3P4 386 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 RFNGQ9Y644 331 aa11.45□□□□□ -0.58
COL8A1-202ENST00000273342 TRBV6-7A0A0A0MS04 114 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 SRSF10O75494 262 aaKnown RBP11.44□□□□□ -0.58
COL8A1-202ENST00000273342 SMIM6P0DI80 62 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 HKR1P10072 659 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 GFERP55789 205 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms