RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 FAM25CB3EWG5 89 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 FAM25GB3EWG6 89 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 MSTNO14793 375 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 UPK1BO75841 260 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 CBR1P16152 277 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 TALDO1P37837 337 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 MAP2K3P46734 347 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 CLDN12P56749 244 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 RIPPLY1Q0D2K3 151 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 PMPCAQ10713 525 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 UBE2NLQ5JXB2 153 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 ZNF474Q6S9Z5 364 aaPredicted RBP12.23□□□□□ -0.45
SS18-201ENST00000269137 BHLHA15Q7RTS1 189 aaPredicted RBP12.23□□□□□ -0.45
SS18-201ENST00000269137 ZNF554Q86TJ5 538 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 SNX29P2Q8IUI4 249 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 OR5AS1Q8N127 324 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 GDPD1Q8N9F7 314 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 SLC30A7Q8NEW0 376 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 SEMA6DQ8NFY4 1073 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 OR13C9Q8NGT0 318 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 SLC25A28Q96A46 364 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 UQCC2Q9BRT2 126 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 CHST5Q9GZS9 411 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 SRRQ9GZT4 340 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 PIGMQ9H3S5 423 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 PIGLQ9Y2B2 252 aa12.23□□□□□ -0.45
SS18-201ENST00000269137 hCG_38984A0A1B0GV85 526 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 J3QW42 95 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 ALDOBP05062 364 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 CCL2P13500 99 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 CCNOP22674 350 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 HTR2CP28335 458 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 HOXC12P31275 282 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 FAM3AP98173 230 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 ZNF92Q03936 586 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 OR8B8Q15620 311 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 TSC22D1Q15714 1073 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 ZNF181Q2M3W8 571 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 METTL17Q9H7H0 456 aaPredicted RBP12.22□□□□□ -0.45
SS18-201ENST00000269137 EXTL2Q9UBQ6 330 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 ZNF629Q9UEG4 869 aaPredicted RBP12.22□□□□□ -0.45
SS18-201ENST00000269137 RHBDD3Q9Y3P4 386 aa12.22□□□□□ -0.45
SS18-201ENST00000269137 MYO7BQ6PIF6 2116 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 A0A0G2JNJ9 132 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 FUOMA2VDF0 154 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 ICMTO60725 284 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 IGKV3-15P01624 115 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 FAHP16930 419 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 ACKR3P25106 362 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 RANBP1P43487 201 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 GSK3AP49840 483 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 BCAP31P51572 246 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 CAPZA1P52907 286 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 MALLQ13021 153 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 TBC1D28Q2M2D7 210 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 C1QTNF12Q5T7M4 302 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 ZBTB37Q5TC79 503 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 JAGN1Q8N5M9 183 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 FAM169BQ8N8A8 192 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 OR4M1Q8NGD0 313 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 OR52N4Q8NGI2 321 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 SSC4DQ8WTU2 575 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 FAM3DQ96BQ1 224 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 SORCS2Q96PQ0 1159 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 REPIN1Q9BWE0 567 aaKnown RBP12.21□□□□□ -0.45
SS18-201ENST00000269137 ABCG5Q9H222 651 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 Q9UFV3 132 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 CGGBP1Q9UFW8 167 aaPredicted RBP12.21□□□□□ -0.45
SS18-201ENST00000269137 PCNX1Q96RV3 2341 aa12.21□□□□□ -0.45
SS18-201ENST00000269137 SHANK1Q9Y566 2161 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 IGKV1-9A0A0C4DH69 117 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 LOC100289279A0A1B0GTE1 492 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 ISPDA4D126 451 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 OR5H1A6NKK0 313 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 A8MXE2 369 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 PRF1P14222 555 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 PSMB1P20618 241 aaKnown RBP12.21□□□□□ -0.46
SS18-201ENST00000269137 WNT5AP41221 380 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 MRPL49Q13405 166 aaKnown RBP12.21□□□□□ -0.46
SS18-201ENST00000269137 TNK1Q13470 666 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 P2RY14Q15391 338 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 TMEM42Q69YG0 159 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 PAQR4Q8N4S7 273 aaPredicted RBP12.21□□□□□ -0.46
SS18-201ENST00000269137 ST6GALNAC3Q8NDV1 305 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 RAB40AQ8WXH6 277 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 SLC25A38Q96DW6 304 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 OPA3Q9H6K4 179 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 MOV10Q9HCE1 1003 aaKnown RBP12.21□□□□□ -0.46
SS18-201ENST00000269137 RABL2AQ9UBK7 228 aaPredicted RBP12.21□□□□□ -0.46
SS18-201ENST00000269137 RABL2BQ9UNT1 228 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 AMDHD2Q9Y303 409 aa12.21□□□□□ -0.46
SS18-201ENST00000269137 A0A1W2PR80 420 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 ERVH48-1M5A8F1 160 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 NR4A2P43354 598 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 PITPNBP48739 271 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 POU3F4P49335 361 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 IDH3GP51553 393 aaPredicted RBP12.2□□□□□ -0.46
SS18-201ENST00000269137 ART1P52961 327 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 C2orf76Q3KRA6 126 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms