RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 PTTG3PQ9NZH4 202 aa12.19□□□□□ -0.46
SSBP1-201ENST00000265304 MYEF2Q9P2K5 600 aaKnown RBP12.19□□□□□ -0.46
SSBP1-201ENST00000265304 TANC2Q9HCD6 1990 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 MYL12BO14950 172 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 DHRS3O75911 302 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 PTBP3O95758 552 aaKnown RBP12.18□□□□□ -0.46
SSBP1-201ENST00000265304 CST4P01036 141 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 EEF1B2P24534 225 aaKnown RBP12.18□□□□□ -0.46
SSBP1-201ENST00000265304 TIGD6Q17RP2 521 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 SPATA46Q5T0L3 261 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 TMEM42Q69YG0 159 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 VHLLQ6RSH7 139 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 DOK3Q7L591 496 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 SVOPQ8N4V2 548 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 CSNK2A3Q8NEV1 391 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 OR14K1Q8NGZ2 314 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 OR51E1Q8TCB6 317 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 NINJ1Q92982 152 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 PIGTQ969N2 578 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 PGLYRP3Q96LB9 341 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 SLC22A4Q9H015 551 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 MS4A5Q9H3V2 200 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 UBTD1Q9HAC8 227 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 BRD7Q9NPI1 651 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 MRPL15Q9P015 296 aaKnown RBP12.18□□□□□ -0.46
SSBP1-201ENST00000265304 DUSP13Q9UII6 198 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 GPR160Q9UJ42 338 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 EDARQ9UNE0 448 aa12.18□□□□□ -0.46
SSBP1-201ENST00000265304 DYSFO75923 2080 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 CREBBPQ92793 2442 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 TRBV2A0A0J9YWF9 115 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 MTRF1O75570 445 aaKnown RBP12.17□□□□□ -0.46
SSBP1-201ENST00000265304 CD55P08174 381 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 BMP4P12644 408 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 ZNF12P17014 697 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 ACHEP22303 614 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 ACKR3P25106 362 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 MAP2K3P46734 347 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 RPS11P62280 158 aaKnown RBP eCLIP12.17□□□□□ -0.46
SSBP1-201ENST00000265304 MLLT11Q13015 90 aaPredicted RBP12.17□□□□□ -0.46
SSBP1-201ENST00000265304 OR2T2Q6IF00 324 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 Q6ZR03 302 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 MRPL21Q7Z2W9 205 aaKnown RBP12.17□□□□□ -0.46
SSBP1-201ENST00000265304 FCGR1BQ92637 280 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 LURAP1Q96LR2 239 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 DIRC2Q96SL1 478 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 SYT3Q9BQG1 590 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 SOX7Q9BT81 388 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 LIME1Q9H400 295 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 TAAR3PQ9P1P4 343 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 ZDHHC8Q9ULC8 765 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 CSMD2Q7Z408 3487 aa12.17□□□□□ -0.46
SSBP1-201ENST00000265304 TEX15Q9BXT5 2789 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 A0A087WXM4 84 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 C17orf100A8MU93 164 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 M0R233 179 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 TBX1O43435 398 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 LILRA1O75019 489 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 ALX3O95076 343 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 RAF1P04049 648 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 CPEP16870 476 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 JUNBP17275 347 aaPredicted RBP12.16□□□□□ -0.46
SSBP1-201ENST00000265304 CDH15P55291 814 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 SNRPD2P62316 118 aaKnown RBP12.16□□□□□ -0.46
SSBP1-201ENST00000265304 ZMAT1Q5H9K5 638 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 FAM209AQ5JX71 171 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 SYT6Q5T7P8 510 aaPredicted RBP12.16□□□□□ -0.46
SSBP1-201ENST00000265304 ZNF367Q7RTV3 350 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 OR56B2PQ8NGI1 322 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 OR13G1Q8NGZ3 307 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 OR5AK2Q8NH90 309 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 RGP1Q92546 391 aaPredicted RBP12.16□□□□□ -0.46
SSBP1-201ENST00000265304 GHSRQ92847 366 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 MGLLQ99685 303 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 HHLA2Q9UM44 414 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 LAMP3Q9UQV4 416 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 ZNF281Q9Y2X9 895 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 PMF1-BGLAPU3KQ54 211 aa12.16□□□□□ -0.46
SSBP1-201ENST00000265304 TRBV5-5A0A0J9YX44 114 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 LOC107986453A0A1B0GWG9 222 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 P2RY10O00398 339 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 GMDSO60547 372 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 SC5DO75845 299 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 MAP2K4P45985 399 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 RIPPLY1Q0D2K3 151 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 PCGF3Q3KNV8 242 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 FAM76BQ5HYJ3 339 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 FTMTQ8N4E7 242 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 MS4A15Q8N5U1 240 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 CELF2-AS1Q8N7Q2 184 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 TSPAN14Q8NG11 270 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 OPALINQ96PE5 141 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 PDCD1LG2Q9BQ51 273 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 GSX2Q9BZM3 304 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 CCDC90BQ9GZT6 254 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 ZNF275Q9NSD4 429 aaPredicted RBP12.15□□□□□ -0.46
SSBP1-201ENST00000265304 BEX4Q9NWD9 120 aaPredicted RBP12.15□□□□□ -0.46
SSBP1-201ENST00000265304 FZR1Q9UM11 496 aa12.15□□□□□ -0.46
SSBP1-201ENST00000265304 SF3B6Q9Y3B4 125 aaKnown RBP12.15□□□□□ -0.46
SSBP1-201ENST00000265304 NOP16Q9Y3C1 178 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms