RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ZNF581Q9P0T4 197 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 PPP4R1LQ9P1A2 415 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 A0A1B0GX78 115 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 FAM221AA4D161 298 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 TMEM200CA6NKL6 621 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 H3BMH7 237 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 CRHP06850 196 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 CELA2AP08217 269 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 NME2P22392 152 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 GABRR1P24046 479 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 OR3A2P47893 321 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 RBM39Q14498 530 aaKnown RBP8.07□□□□□ -1.12
MSH4-201ENST00000263187 ANKRD55Q3KP44 614 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 CLEC18BQ6UXF7 455 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 C20orf196Q8IYI0 205 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 CLRN3Q8NCR9 226 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 NUBPLQ8TB37 319 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 RNF126Q9BV68 326 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 FAM117AQ9C073 453 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 MED9Q9NWA0 146 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 MLXQ9UH92 298 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 CYB5R1Q9UHQ9 305 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 TMEM131Q92545 1883 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 LILRA5A6NI73 299 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 DBHP09172 617 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 QDPRP09417 244 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 FSTP19883 344 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 ZNF41P51814 821 aaPredicted RBP8.07□□□□□ -1.12
MSH4-201ENST00000263187 DCAF7P61962 342 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 CSNK2A1P68400 391 aaPredicted RBP8.07□□□□□ -1.12
MSH4-201ENST00000263187 RAB32Q13637 225 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 APCDD1LQ8NCL9 501 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 CSNK2A3Q8NEV1 391 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 TMEM59Q9BXS4 323 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 MTCH2Q9Y6C9 303 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 ZNF878C9JN71 531 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 LMO7DNF2Z398 122 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 ADAM10O14672 748 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 TMEM127O75204 238 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 WDPCPO95876 746 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 FAHP16930 419 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 SPINK2P20155 84 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 CD27P26842 260 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 LAP3P28838 519 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 NPBWR1P48145 328 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 CX3CR1P49238 355 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 HNRNPKP61978 463 aaKnown RBP eCLIP8.07□□□□□ -1.12
MSH4-201ENST00000263187 H3F3CQ6NXT2 135 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 PGAP1Q75T13 922 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.07□□□□□ -1.12
MSH4-201ENST00000263187 UEVLDQ8IX04 471 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 ESX1Q8N693 406 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 TERB2Q8NHR7 220 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 DYRK2Q92630 601 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 TMEM230Q96A57 120 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 DDIT4LQ96D03 193 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 GUCD1Q96NT3 240 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 OR6C1Q96RD1 312 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 SLCO5A1Q9H2Y9 848 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 EHFQ9NZC4 300 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 B3GAT1Q9P2W7 334 aa8.07□□□□□ -1.12
MSH4-201ENST00000263187 A0A1B0GW55 424 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 A0A1W2PR77 199 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 TMEM218A2RU14 115 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 A6NIZ1 184 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 LIPT2A6NK58 231 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 STMND1H3BQB6 276 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 CDC14BO60729 498 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 DUX4L2P0CJ85 424 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 DUX4L3P0CJ86 424 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 DUX4L4P0CJ87 422 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 DUX4L5P0CJ88 424 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 DUX4L6P0CJ89 424 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 DUX4L7P0CJ90 424 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 BLVRBP30043 206 aaPredicted RBP8.06□□□□□ -1.12
MSH4-201ENST00000263187 MMP16P51512 607 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 RAP1BP61224 184 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 RAP1AP62834 184 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 QRFPP83859 136 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 C17orf67Q0P5P2 114 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 TOMM20Q15388 145 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 SP6Q3SY56 376 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 IQCF2Q8IXL9 164 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 SLC25A45Q8N413 288 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 NKAIN3Q8N8D7 197 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 SMRP1Q8NCR6 262 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 THRSPQ92748 146 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 PIK3IP1Q96FE7 263 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 GPR27Q9NS67 375 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 DUX4Q9UBX2 424 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 AHCTF1Q8WYP5 2266 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 CACNA1EQ15878 2313 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 IGKV1D-8A0A087WSZ0 117 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 A0A1W2PQD3 144 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 OR5H15A6NDH6 313 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 SLC33A1O00400 549 aaPredicted RBP8.06□□□□□ -1.12
MSH4-201ENST00000263187 DUX1O43812 170 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 ANGPTL7O43827 346 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 ISG15P05161 165 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 PNLIPP16233 465 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms