RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 KIR3DL2P43630 455 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 LSM6P62312 80 aaKnown RBP11.49□□□□□ -0.57
SGCA-201ENST00000262018 ACTG1P63261 375 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 BSPH1Q075Z2 132 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 RAB35Q15286 201 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 CR1LQ2VPA4 569 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 FAM27D1Q5T7N8 215 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 AGAP6Q5VW22 663 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 ZNF544Q6NX49 715 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 MZT2AQ6P582 158 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 METAP1DQ6UB28 335 aaPredicted RBP11.49□□□□□ -0.57
SGCA-201ENST00000262018 DCDC5Q6ZRR9 648 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 AAED1Q7RTV5 226 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 TUSC5Q8IXB3 177 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 PRSS35Q8N3Z0 413 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 OR5AK2Q8NH90 309 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 THRSPQ92748 146 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 KCTD12Q96CX2 325 aaKnown RBP11.49□□□□□ -0.57
SGCA-201ENST00000262018 KCNS3Q9BQ31 491 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 SLC30A2Q9BRI3 323 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 C1orf198Q9H425 327 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 SEC61A2Q9H9S3 476 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 EMC7Q9NPA0 242 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 DPRXA6NFQ7 191 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 ANKRD61A6NGH8 418 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 ZNF879B4DU55 563 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 ARL6IP5O75915 188 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 MSR1P21757 451 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 SRP14P37108 136 aaKnown RBP11.48□□□□□ -0.57
SGCA-201ENST00000262018 OXA1LQ15070 435 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 TSC22D1Q15714 1073 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 TAB1Q15750 504 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 WDR38Q5JTN6 314 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 OR7E24Q6IFN5 339 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 CORO6Q6QEF8 472 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 SPATC1Q76KD6 591 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 RHOUQ7L0Q8 258 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 CCDC190Q86UF4 302 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 CATSPERDQ86XM0 798 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 OR10S1Q8NGN2 331 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 OR2AJ1Q8NGZ0 328 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 NABP1Q96AH0 204 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 SLAMF6Q96DU3 332 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 ULBP2Q9BZM5 246 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 COMMD4Q9H0A8 199 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 NELFAQ9H3P2 528 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 ETAA1Q9NY74 926 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 RABL2AQ9UBK7 228 aaPredicted RBP11.48□□□□□ -0.57
SGCA-201ENST00000262018 RABL2BQ9UNT1 228 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 R4GMQ9 66 aa11.48□□□□□ -0.57
SGCA-201ENST00000262018 CTDSP2O14595 271 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 PIN1P1O15428 100 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 VENTXO95231 258 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 PNPP00491 289 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 TGFAP01135 160 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 H2BFMP0C1H6 154 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 GUCA1AP43080 201 aaPredicted RBP11.47□□□□□ -0.57
SGCA-201ENST00000262018 ZNF84P51523 738 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 Q499Y3 187 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 DDI2Q5TDH0 399 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 ZNF676Q8N7Q3 588 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 IL17RDQ8NFM7 739 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 ZNF775Q96BV0 537 aaPredicted RBP11.47□□□□□ -0.57
SGCA-201ENST00000262018 DERL3Q96Q80 235 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 OR14A2Q96R54 314 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 B3GAT2Q9NPZ5 323 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 POLR1DQ9Y2S0 133 aa11.47□□□□□ -0.57
SGCA-201ENST00000262018 NOSIPQ9Y314 301 aaKnown RBP11.47□□□□□ -0.57
SGCA-201ENST00000262018 SMIM30A4D0T7 59 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 J3QRK9 145 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 APOA1P02647 267 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 IL32P24001 234 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 MAPK3P27361 379 aaPredicted RBP11.46□□□□□ -0.57
SGCA-201ENST00000262018 COMPP49747 757 aaPredicted RBP11.46□□□□□ -0.57
SGCA-201ENST00000262018 CAV3P56539 151 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 PPP3R1P63098 170 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 HIST1H3AP68431 136 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 MRPS34P82930 218 aaKnown RBP11.46□□□□□ -0.57
SGCA-201ENST00000262018 MFGE8Q08431 387 aaPredicted RBP11.46□□□□□ -0.57
SGCA-201ENST00000262018 ENDOGQ14249 297 aaKnown RBP11.46□□□□□ -0.57
SGCA-201ENST00000262018 SGCAQ16586 387 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 HSD17B12Q53GQ0 312 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 HIST2H3PS2Q5TEC6 136 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 CFAP77Q6ZQR2 320 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 HIST2H3AQ71DI3 136 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 NR2C2APQ86WQ0 139 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.46□□□□□ -0.57
SGCA-201ENST00000262018 CENPSQ8N2Z9 138 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 GPR137CQ8N3F9 429 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 GPR148Q8TDV2 347 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 GCDHQ92947 438 aaPredicted RBP11.46□□□□□ -0.57
SGCA-201ENST00000262018 ATF6BQ99941 703 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 ZNF416Q9BWM5 594 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 LINC00470Q9BZP3 86 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 ZCCHC4Q9H5U6 513 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 OCEL1Q9H607 264 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 C12orf49Q9H741 205 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 NIPAL2Q9H841 368 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 NOX4Q9NPH5 578 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 PNRC2Q9NPJ4 139 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms