RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-201ENST00000261443 EREGO14944 169 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 FGF17O60258 216 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 OR6A2O95222 327 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 CSTAP01040 98 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 IGKV1D-16P01601 117 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 S1PR1P21453 382 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 CXCR1P25024 350 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 PPP1CCP36873 323 aaKnown RBP6.44□□□□□ -1.38
CSDE1-201ENST00000261443 TM4SF4P48230 202 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 AFF3P51826 1226 aaKnown RBP6.44□□□□□ -1.38
CSDE1-201ENST00000261443 ADPRHP54922 357 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 CDK3Q00526 305 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 UNC119Q13432 240 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 PRICKLE4Q2TBC4 344 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 C4orf17Q53FE4 359 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 LCN10Q6JVE6 187 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 SLC22A25Q6T423 547 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 VN1R4Q7Z5H5 301 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 RTN4RL2Q86UN3 420 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 ZNF664Q8N3J9 261 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 BEND2Q8NDZ0 799 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 ERGIC1Q969X5 290 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 TSPAN32Q96QS1 320 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 HIST1H2BLQ99880 126 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 RTBDNQ9BSG5 229 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-201ENST00000261443 SLC25A31Q9H0C2 315 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 HHLA2Q9UM44 414 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 STRAPQ9Y3F4 350 aaKnown RBP6.44□□□□□ -1.38
CSDE1-201ENST00000261443 VPS13AQ96RL7 3174 aa6.44□□□□□ -1.38
CSDE1-201ENST00000261443 IGKV1D-42A0A075B6H8 117 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 A0A087WWC5 75 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 C9J4A7 227 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 DEDDO75618 318 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 NKX2-2O95096 273 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 SCGB1D2O95969 90 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 SOD2P04179 222 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 SLC35G6P0C7Q6 338 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 GLRA1P23415 457 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 FPR2P25090 351 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 PEBP1P30086 187 aaKnown RBP6.43□□□□□ -1.38
CSDE1-201ENST00000261443 DLK1P80370 383 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 ENPP2Q13822 863 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 ZNF74Q16587 644 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 SLC18B1Q6NT16 456 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 CATSPERDQ86XM0 798 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 LRRC18Q8N456 261 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 NKAIN3Q8N8D7 197 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 LRRC75AQ8NAA5 344 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 NAXEQ8NCW5 288 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 LFNGQ8NES3 379 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 OR52R1Q8NGF1 315 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 FAM213BQ8TBF2 198 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 ABHD5Q8WTS1 349 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 FRZBQ92765 325 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 DDA1Q9BW61 102 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 SIRT7Q9NRC8 400 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 OR1A2Q9Y585 309 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 SDK1Q7Z5N4 2213 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 MARCH11A6NNE9 402 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 LMX1BO60663 402 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 ZNF217O75362 1048 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 GABRA4P48169 554 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 RGS19P49795 217 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 RPL18Q07020 188 aaKnown RBP6.43□□□□□ -1.38
CSDE1-201ENST00000261443 JOSD1Q15040 202 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-201ENST00000261443 EMC4Q5J8M3 183 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 PTCRAQ6ISU1 281 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-201ENST00000261443 KCTD18Q6PI47 426 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-201ENST00000261443 ADAMTSL4Q6UY14 1074 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 ERN2Q76MJ5 926 aaKnown RBP6.43□□□□□ -1.38
CSDE1-201ENST00000261443 Q7L0L9 218 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 CACUL1Q86Y37 369 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 SHISA5Q8N114 240 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 LPAR4Q99677 370 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 SH3BGRL3Q9H299 93 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 ARV1Q9H2C2 271 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 OR14J1Q9UGF5 321 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 TRPM6Q9BX84 2022 aa6.43□□□□□ -1.38
CSDE1-201ENST00000261443 LOC107986453A0A1B0GWG9 222 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 MASP2O00187 686 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 SCGNO76038 276 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 KNG1P01042 644 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 GIMD1P0DJR0 217 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 GZMBP10144 247 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 ZNF25P17030 456 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-201ENST00000261443 SUCLG1P53597 346 aaKnown RBP6.42□□□□□ -1.38
CSDE1-201ENST00000261443 RPS15AP62244 130 aaKnown RBP6.42□□□□□ -1.38
CSDE1-201ENST00000261443 SLC10A1Q14973 349 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 ZNHIT3Q15649 155 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-201ENST00000261443 HIKESHIQ53FT3 197 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 FAM78AQ5JUQ0 283 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 VAX1Q5SQQ9 334 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 COL13A1Q5TAT6 717 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-201ENST00000261443 COX15Q7KZN9 410 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 GALNTL5Q7Z4T8 443 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 MARCH3Q86UD3 253 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 OR9A4Q8NGU2 314 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 OR5H2Q8NGV7 314 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 SNIP1Q8TAD8 396 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms