RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 HSPB2Q16082 182 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 TMEM244Q5VVB8 128 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 SKA3Q8IX90 412 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 NKAIN3Q8N8D7 197 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 OR5H2Q8NGV7 314 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 CD300LFQ8TDQ1 290 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 THAP3Q8WTV1 239 aaPredicted RBP14.12□□□□□ -0.15
LMNB1-201ENST00000261366 ARL5BQ96KC2 179 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 ZNF251Q9BRH9 671 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 RAB33BQ9H082 229 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 RHBDD3Q9Y3P4 386 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 PHF3Q92576 2039 aaKnown RBP14.12□□□□□ -0.15
LMNB1-201ENST00000261366 TTRP02766 147 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 HCKP08631 526 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 ITGA3P26006 1051 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 DLX2Q07687 328 aaPredicted RBP14.12□□□□□ -0.15
LMNB1-201ENST00000261366 HYAL1Q12794 435 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 ACER2Q5QJU3 275 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 SHISA6Q6ZSJ9 500 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 TTLL10Q6ZVT0 673 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 SLC22A18ASQ8N1D0 253 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 ST7LQ8TDW4 575 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 SPACA1Q9HBV2 294 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 EHFQ9NZC4 300 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 GPR132Q9UNW8 380 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 POLR1DQ9Y2S0 133 aa14.12□□□□□ -0.15
LMNB1-201ENST00000261366 TRBV6-7A0A0A0MS04 114 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 H3BML4 177 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 PLPP3O14495 311 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 AHSA1O95433 338 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 ZNF20P17024 532 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 CEBPGP53567 150 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 IAH1Q2TAA2 248 aaPredicted RBP14.11□□□□□ -0.15
LMNB1-201ENST00000261366 SMIM8Q96KF7 97 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 RGCCQ9H4X1 137 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 FBXL17Q9UF56 701 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 CACFD1Q9UGQ2 172 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 VDAC3Q9Y277 283 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 MRPS28Q9Y2Q9 187 aaKnown RBP14.11□□□□□ -0.15
LMNB1-201ENST00000261366 A0A1W2PPE2 198 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 C7orf77A4D0Y5 90 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 NPIPA5E9PKD4 350 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 SRSF10O75494 262 aaKnown RBP14.11□□□□□ -0.15
LMNB1-201ENST00000261366 HEXAP06865 529 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 TAS2R31P59538 309 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 CSNK2A1P68400 391 aaPredicted RBP14.11□□□□□ -0.15
LMNB1-201ENST00000261366 PLCXD2Q0VAA5 305 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 PRTGQ2VWP7 1150 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 HLA-DQA1Q5Y7H0 255 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 FAHD2BQ6P2I3 314 aaPredicted RBP14.11□□□□□ -0.15
LMNB1-201ENST00000261366 ABHD12BQ7Z5M8 362 aaPredicted RBP14.11□□□□□ -0.15
LMNB1-201ENST00000261366 ZNF248Q8NDW4 579 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 CSNK2A3Q8NEV1 391 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 OR13G1Q8NGZ3 307 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 SLC25A43Q8WUT9 341 aaPredicted RBP14.11□□□□□ -0.15
LMNB1-201ENST00000261366 FAHD2AQ96GK7 314 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 RTBDNQ9BSG5 229 aaPredicted RBP14.11□□□□□ -0.15
LMNB1-201ENST00000261366 PBOV1Q9GZY1 135 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 LPAR5Q9H1C0 372 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 NPIPA1Q9UND3 350 aa14.11□□□□□ -0.15
LMNB1-201ENST00000261366 DOCK8Q8NF50 2099 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 EIF1BO60739 113 aaKnown RBP14.1□□□□□ -0.15
LMNB1-201ENST00000261366 TSPAN15O95858 294 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 FCGR3AP08637 254 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 SMIM6P0DI80 62 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 EIF1P41567 113 aaKnown RBP14.1□□□□□ -0.15
LMNB1-201ENST00000261366 PNLIPRP3Q17RR3 467 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 MIDNQ504T8 468 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 C9orf152Q5JTZ5 239 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 KLHL24Q6TFL4 600 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 ARHGEF39Q8N4T4 335 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 C5orf34Q96MH7 638 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 CDC6Q99741 560 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 ELL3Q9HB65 397 aaPredicted RBP14.1□□□□□ -0.15
LMNB1-201ENST00000261366 ZNF701Q9NV72 531 aaPredicted RBP14.1□□□□□ -0.15
LMNB1-201ENST00000261366 ZNF107Q9UII5 783 aaPredicted RBP14.1□□□□□ -0.15
LMNB1-201ENST00000261366 ASXL3Q9C0F0 2248 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 LOC390937A0A1W2PQ73 354 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 TNFP01375 233 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 CRABP1P29762 137 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 QRFPP83859 136 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 RSPO4Q2I0M5 234 aaPredicted RBP14.1□□□□□ -0.15
LMNB1-201ENST00000261366 SLAMF6Q96DU3 332 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 BSCL2Q96G97 398 aaPredicted RBP14.1□□□□□ -0.15
LMNB1-201ENST00000261366 TGM7Q96PF1 710 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 DUSP15Q9H1R2 295 aaPredicted RBP14.1□□□□□ -0.15
LMNB1-201ENST00000261366 SLC26A1Q9H2B4 701 aa14.1□□□□□ -0.15
LMNB1-201ENST00000261366 VSX1Q9NZR4 365 aaPredicted RBP14.1□□□□□ -0.15
LMNB1-201ENST00000261366 K7EPK0 472 aa14.09□□□□□ -0.15
LMNB1-201ENST00000261366 CLN5O75503 358 aa14.09□□□□□ -0.15
LMNB1-201ENST00000261366 OR13C7P0DN81 318 aa14.09□□□□□ -0.15
LMNB1-201ENST00000261366 RPL12P30050 165 aaKnown RBP14.09□□□□□ -0.15
LMNB1-201ENST00000261366 FCGR2CP31995 323 aa14.09□□□□□ -0.15
LMNB1-201ENST00000261366 CDAP32320 146 aa14.09□□□□□ -0.15
LMNB1-201ENST00000261366 ASCL1P50553 236 aa14.09□□□□□ -0.15
LMNB1-201ENST00000261366 P2RY4P51582 365 aa14.09□□□□□ -0.15
LMNB1-201ENST00000261366 GFERP55789 205 aa14.09□□□□□ -0.15
LMNB1-201ENST00000261366 TMEM50BP56557 158 aa14.09□□□□□ -0.15
LMNB1-201ENST00000261366 SLC26A5P58743 744 aa14.09□□□□□ -0.15
LMNB1-201ENST00000261366 HGFACQ04756 655 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms