RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 DNAJB3Q8WWF6 145 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 ACOT11Q8WXI4 607 aaPredicted RBP3.11□□□□□ -1.91
CCDC54-201ENST00000261058 RORBQ92753 470 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 CDS1Q92903 461 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 STMN2Q93045 179 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 EXOSC8Q96B26 276 aaKnown RBP3.11□□□□□ -1.91
CCDC54-201ENST00000261058 CXorf40BQ96DE9 158 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF641Q96N77 438 aaPredicted RBP3.11□□□□□ -1.91
CCDC54-201ENST00000261058 PFDN5Q99471 154 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 TIMM29Q9BSF4 260 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 SRXN1Q9BYN0 137 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 CHIAQ9BZP6 476 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 UCK2Q9BZX2 261 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 NAT10Q9H0A0 1025 aaKnown RBP3.11□□□□□ -1.91
CCDC54-201ENST00000261058 MAT2BQ9NZL9 334 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 SMPXQ9UHP9 88 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 SLC17A4Q9Y2C5 497 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 GOLT1BQ9Y3E0 138 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 MRPS18BQ9Y676 258 aaKnown RBP3.11□□□□□ -1.91
CCDC54-201ENST00000261058 RB1CC1Q8TDY2 1594 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 FAM135BQ49AJ0 1406 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 PBRM1Q86U86 1689 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 FAM25AB3EWG3 89 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 FAM25CB3EWG5 89 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 FAM25GB3EWG6 89 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ANKRD65E5RJM6 399 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 M0QZ92 97 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 M0R036 132 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 GOSR2O14653 212 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 AQP9O43315 295 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 FADS1O60427 444 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 EIF4E2O60573 245 aaKnown RBP3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ATP5LO75964 103 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 IFNA21P01568 189 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 OCM2P0CE71 109 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF19P17023 458 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 NPR2P20594 1047 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 PSMB1P20618 241 aaKnown RBP3.1□□□□□ -1.91
CCDC54-201ENST00000261058 OGNP20774 298 aaKnown RBP3.1□□□□□ -1.91
CCDC54-201ENST00000261058 CCR7P32248 378 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 SHMT2P34897 504 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 CA5AP35218 305 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 CEACAM3P40198 252 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 MAGEA12P43365 314 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 GABRA4P48169 554 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 IDH2P48735 452 aaKnown RBP3.1□□□□□ -1.91
CCDC54-201ENST00000261058 DIO3P55073 304 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 TMEM33P57088 247 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 KRR1Q13601 381 aaKnown RBP3.1□□□□□ -1.91
CCDC54-201ENST00000261058 IRF4Q15306 451 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 DGUOKQ16854 277 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 RPEL1Q2QD12 228 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ABHD13Q7L211 337 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 SSX7Q7RTT5 188 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 HS3ST5Q8IZT8 346 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 PUSL1Q8N0Z8 303 aaKnown RBP3.1□□□□□ -1.91
CCDC54-201ENST00000261058 RIBC1Q8N443 379 aaPredicted RBP3.1□□□□□ -1.91
CCDC54-201ENST00000261058 C14orf178Q8N769 122 aaPredicted RBP3.1□□□□□ -1.91
CCDC54-201ENST00000261058 OR56A4Q8NGH8 313 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 OR6K2Q8NGY2 324 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 LINC01006Q8NI28 216 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 STOML3Q8TAV4 291 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 DYNC2LI1Q8TCX1 351 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 UFD1Q92890 307 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 CCDC126Q96EE4 140 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 AIF1LQ9BQI0 150 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 DCUN1D5Q9BTE7 237 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 RNF126Q9BV68 326 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ULBP1Q9BZM6 244 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 PORCNQ9H237 461 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF430Q9H8G1 570 aaPredicted RBP3.1□□□□□ -1.91
CCDC54-201ENST00000261058 PATZ1Q9HBE1 687 aaKnown RBP3.1□□□□□ -1.91
CCDC54-201ENST00000261058 HRASLSQ9HDD0 168 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF256Q9Y2P7 627 aaPredicted RBP3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ALG5Q9Y673 324 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 V9GYY9 64 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ANKRD36BQ8N2N9 1353 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF532Q9HCE3 1301 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 YEATS2Q9ULM3 1422 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 RIMS2Q9UQ26 1411 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 A0A1B0GUS0 222 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 FAM92AA1XBS5 289 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 PSMD12O00232 456 aaPredicted RBP3.1□□□□□ -1.91
CCDC54-201ENST00000261058 CDC7O00311 574 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 DCTN6O00399 190 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ARPC5O15511 151 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 SGCEO43556 437 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 UGT1A9O60656 530 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ADAP1O75689 374 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 UGT2B17O75795 530 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 SC5DO75845 299 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 SULT1C4O75897 302 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 CTDNEP1O95476 244 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ACTL6AO96019 429 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 IFNA5P01569 189 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 IGHV3-48P01763 117 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 DUX4L4P0CJ87 422 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 RD3LP0DJH9 198 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 SCGB1A1P11684 91 aa3.1□□□□□ -1.91
CCDC54-201ENST00000261058 ZBTB25P24278 435 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms