RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 KTI12Q96EK9 354 aaPredicted RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF479Q96JC4 524 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 INPP5EQ9NRR6 644 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 GAGE12BA1L429 117 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ZBTB42B2RXF5 422 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC16A7O60669 478 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF205O95201 554 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ADRA2AP08913 450 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 CYBAP13498 195 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 PRPH2P23942 346 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC19A1P41440 591 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 SNRPD1P62314 119 aaKnown RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 CLEC12BQ2HXU8 276 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 FCRLAQ7L513 359 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM123Q8N131 208 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 C12orf76Q8N812 135 aaPredicted RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 OR52I2Q8NH67 350 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 TFGQ92734 400 aaPredicted RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 RAB1CQ92928 201 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 MFRPQ9BY79 579 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF331Q9NQX6 463 aaPredicted RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 RNF186Q9NXI6 227 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 MARCH4Q9P2E8 410 aaPredicted RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 SERGEFQ9UGK8 458 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 FBXW11Q9UKB1 542 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 MYH6P13533 1939 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 DUXBA0A1W2PPF3 345 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 HLA-DOBP13765 273 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 FCGR2CP31995 323 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 ELLP55199 621 aaPredicted RBP6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 TAF10Q12962 218 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 RNF133Q8WVZ7 376 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 SEH1LQ96EE3 360 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 RNF122Q9H9V4 155 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 SERTAD4Q9NUC0 356 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 COLQQ9Y215 455 aaPredicted RBP6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 COX11Q9Y6N1 276 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC38A8A6NNN8 435 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 DEGS1O15121 323 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 CA2P00918 260 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 EIF4EP06730 217 aaKnown RBP6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 ERGP11308 486 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 PTHLHP12272 177 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 AMY2BP19961 511 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 RPL12P30050 165 aaKnown RBP6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 C1QTNF8P60827 252 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 GLYATL3Q5SZD4 288 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 C10orf126Q8N4M7 172 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 GATSQ8NAP1 163 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 OR52B4Q8NGK2 314 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 GLYATL1Q969I3 302 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 MS4A4AQ96JQ5 239 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 PARLQ9H300 379 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 B3GAT1Q9P2W7 334 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 EMCNQ9ULC0 261 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 NPEPPSL1A6NEC2 478 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 TNFSF13O75888 250 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 FGF1P05230 155 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 HPNP05981 417 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 PSG1P11464 419 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF17P17021 662 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 BRS3P32247 399 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 MRPS11P82912 194 aaKnown RBP6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC25A34Q6PIV7 304 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 C15orf39Q6ZRI6 1047 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 OR5H2Q8NGV7 314 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 MZB1Q8WU39 189 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 SPSB4Q96A44 273 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 EFCAB11Q9BUY7 163 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 ULBP2Q9BZM5 246 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 PPT2Q9UMR5 302 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 GFRA2O00451 464 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 TDGF1P13385 188 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 CCL5P13501 91 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 DRD2P14416 443 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF415Q09FC8 603 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 IKZF1Q13422 519 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 PLPPR5Q32ZL2 321 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 LINC00303Q3SY05 128 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 LHFPL2Q6ZUX7 228 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 PRSS45Q7RTY3 260 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF296Q8WUU4 475 aaPredicted RBP6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 MRPL38Q96DV4 380 aaKnown RBP6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 HIST1H2BLQ99880 126 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 ADGRL4Q9HBW9 690 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF256Q9Y2P7 627 aaPredicted RBP6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 ETV7Q9Y603 341 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM129A0AVI4 362 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 GLOD5A6NK44 160 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF716A6NP11 495 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 K7EP13 123 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF735P0CB33 412 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 ACRP10323 421 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 HIST1H1EP10412 219 aaKnown RBP6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 FCER1GP30273 86 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 PTGER4P35408 488 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 PMELP40967 661 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 SELENOWP63302 87 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 BIVMQ86UB2 503 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms