RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 FGF7P21781 194 aa7.84□□□□□ -1.16
PTCD3-201ENST00000254630 EPHA8P29322 1005 aaPredicted RBP7.84□□□□□ -1.16
PTCD3-201ENST00000254630 SSTP61278 116 aa7.84□□□□□ -1.16
PTCD3-201ENST00000254630 ANKRD34AQ69YU3 496 aa7.84□□□□□ -1.16
PTCD3-201ENST00000254630 CXorf67Q86X51 503 aaPredicted RBP7.84□□□□□ -1.16
PTCD3-201ENST00000254630 BPIFCQ8NFQ6 507 aa7.84□□□□□ -1.16
PTCD3-201ENST00000254630 OR11G2Q8NGC1 345 aa7.84□□□□□ -1.16
PTCD3-201ENST00000254630 PCNPQ8WW12 178 aaKnown RBP7.84□□□□□ -1.16
PTCD3-201ENST00000254630 PRRX2Q99811 253 aa7.84□□□□□ -1.16
PTCD3-201ENST00000254630 NDFIP1Q9BT67 221 aa7.84□□□□□ -1.16
PTCD3-201ENST00000254630 P4HTMQ9NXG6 502 aa7.84□□□□□ -1.16
PTCD3-201ENST00000254630 SHANK3Q9BYB0 1731 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 NCBP2LA6PVI3 153 aaKnown RBP7.83□□□□□ -1.16
PTCD3-201ENST00000254630 KRBOX1C9JBD0 128 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 PEX11BO96011 259 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 CRYBA1P05813 215 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 HOXD12P35452 270 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 P2RX3P56373 397 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 SNRPNP63162 240 aaKnown RBP7.83□□□□□ -1.16
PTCD3-201ENST00000254630 TMEM215Q68D42 235 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 FAAP20Q6NZ36 180 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 SLC25A26Q70HW3 274 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 RHOUQ7L0Q8 258 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 C17orf78Q8N4C9 275 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 OR10P1Q8NGE3 313 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 RBPMSQ93062 196 aaKnown RBP7.83□□□□□ -1.16
PTCD3-201ENST00000254630 TRMT61AQ96FX7 289 aaKnown RBP7.83□□□□□ -1.16
PTCD3-201ENST00000254630 PATZ1Q9HBE1 687 aaKnown RBP7.83□□□□□ -1.16
PTCD3-201ENST00000254630 MYO16Q9Y6X6 1858 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 IGHV1OR21-1A0A087WYE8 117 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 LRP3O75074 770 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 YIF1AO95070 293 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 OR5G3P0C626 314 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 ACKR3P25106 362 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF707Q96C28 371 aaPredicted RBP7.83□□□□□ -1.16
PTCD3-201ENST00000254630 DOK1Q99704 481 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 SLC26A1Q9H2B4 701 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 A3GALT2U3KPV4 340 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 IFITM5A6NNB3 132 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 ST8SIA5O15466 376 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 HPP00738 406 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 OPRM1P35372 400 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 GNG10P50151 68 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 PIGPP57054 158 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 TPBGQ13641 420 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 TMEM229BQ8NBD8 167 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 ERGIC1Q969X5 290 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 PARP12Q9H0J9 701 aaKnown RBP7.83□□□□□ -1.16
PTCD3-201ENST00000254630 RNF150Q9ULK6 438 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 A0A0B4J2E0 115 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 TEX51A0A1B0GUA7 166 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 A0A1B0GX12 115 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 FAHP16930 419 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 RPS27P42677 84 aaKnown RBP7.83□□□□□ -1.16
PTCD3-201ENST00000254630 SOHLH1Q5JUK2 328 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 AVPI1Q5T686 147 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 JMJD6Q6NYC1 403 aaPredicted RBP7.83□□□□□ -1.16
PTCD3-201ENST00000254630 VASH2Q86V25 355 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 OR10V1Q8NGI7 309 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 OR4F5Q8NH21 305 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 OR4F4Q96R69 305 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 COMMD5Q9GZQ3 224 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 CRISPLD2Q9H0B8 497 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 DNAJB12Q9NXW2 375 aaKnown RBP7.83□□□□□ -1.16
PTCD3-201ENST00000254630 TRAV1-2A0A0B4J238 106 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 TNFSF14O43557 240 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 MGMTP16455 207 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 LYG2Q86SG7 212 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 SPNS2Q8IVW8 549 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 NUDCD2Q8WVJ2 157 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 SMOC1Q9H4F8 434 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 NARFLQ9H6Q4 476 aa7.83□□□□□ -1.16
PTCD3-201ENST00000254630 A0A1W2PR80 420 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 H2AFB1P0C5Y9 115 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 BAMBIQ13145 260 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 C1orf53Q5VUE5 145 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF793Q6ZN11 406 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 BHLHA15Q7RTS1 189 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-201ENST00000254630 CCDC71Q8IV32 467 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-201ENST00000254630 CA5BP1Q8WTZ4 195 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 CIB3Q96Q77 187 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-201ENST00000254630 C20orf24Q9BUV8 137 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 BARX1Q9HBU1 254 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-201ENST00000254630 GAB2Q9UQC2 676 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 SERTM1A2A2V5 107 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 WDR1O75083 606 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 OR2F2O95006 317 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 GPANK1O95872 356 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 CT45A10P0DMU9 189 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 RAB1AP62820 205 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 FZD5Q13467 585 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 OR2F1Q13607 317 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 TMEM41BQ5BJD5 291 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 LILRA6Q6PI73 481 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 OTOSQ8NHW6 89 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 SLC35B4Q969S0 331 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 TSPAN32Q96QS1 320 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF331Q9NQX6 463 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF391Q9UJN7 358 aa7.82□□□□□ -1.16
PTCD3-201ENST00000254630 E5RGE8 158 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms