RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 A0A0J9YY10 115 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 HRO43593 1189 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 NRASP01111 189 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 HRASP01112 189 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 KRASP01116 189 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 CSNK1DP48730 415 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 SUCLG1P53597 346 aaKnown RBP11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 HSD17B7P56937 341 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 PAX5Q02548 391 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 C1orf61Q13536 156 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 ZNF385CQ66K41 422 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 OR4A47Q6IF82 309 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 PLXDC1Q8IUK5 500 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 GJC3Q8NFK1 279 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 CPEB1Q9BZB8 566 aaKnown RBP11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 BARHL1Q9BZE3 327 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 IL21Q9HBE4 155 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 MSL2Q9HCI7 577 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 LIN7CQ9NUP9 197 aaKnown RBP11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 SPATA6Q9NWH7 488 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 TCRBV5S1A1TA0A578 114 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 PLSCR5A0PG75 271 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 ABCD4O14678 606 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 NID1P14543 1247 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 PCMT1P22061 227 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 UBE3DQ7Z6J8 389 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 PFN4Q8NHR9 129 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 OR5K3A6NET4 321 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 YIF1AO95070 293 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 IAPPP10997 89 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 HIST1H1CP16403 213 aaKnown RBP11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 CXCL3P19876 107 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 TNFSF4P23510 183 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 PNLIPRP3Q17RR3 467 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 SLC16A11Q8NCK7 471 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 ADGRG7Q96K78 797 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 SLC17A9Q9BYT1 436 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 RAB33BQ9H082 229 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 ISG20L2Q9H9L3 353 aaKnown RBP11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 MARCH5Q9NX47 278 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 NTMQ9P121 344 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 MCTS1Q9ULC4 181 aaKnown RBP11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 NTNG1Q9Y2I2 539 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 HCFC2Q9Y5Z7 792 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 CLEC18AA5D8T8 446 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 TAPBPO15533 448 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 GJB3O75712 270 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 FPR2P25090 351 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 CD82P27701 267 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 NTSR1P30989 418 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 CHRNA7P36544 502 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 SELENOPP49908 381 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 COL9A2Q14055 689 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 EMC4Q5J8M3 183 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 THEM4Q5T1C6 240 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 ZNF468Q5VIY5 522 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 FAM78BQ5VT40 261 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 DRAM2Q6UX65 266 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 MAMSTRQ6ZN01 415 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 ZNF813Q6ZN06 617 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 CLEC18CQ8NCF0 446 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 OR4S1Q8NGB4 309 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 NAT8Q9UHE5 227 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 WASHC3Q9Y3C0 194 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 PIAS3Q9Y6X2 628 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 SLC22A20A6NK97 555 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 M0R2Z0 102 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 DUS4LO95620 317 aaKnown RBP11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 RAC1P63000 192 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 SSX1Q16384 188 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 DHRS7BQ6IAN0 325 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 HTR3DQ70Z44 454 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 ZNF547Q8IVP9 402 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 MISPQ8IVT2 679 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 LRRC18Q8N456 261 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 OR10G3Q8NGC4 313 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 TBX15Q96SF7 602 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 SEMA6CQ9H3T2 930 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 FBXL17Q9UF56 701 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 OPN4Q9UHM6 478 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 A0A1W2PPE2 198 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 ERVH48-1M5A8F1 160 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 WDR1O75083 606 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 OPRM1P35372 400 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 ERVS71-1P61550 626 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 RAB32Q13637 225 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 ZNF542PQ5EBM4 170 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 APOBEC3BQ9UH17 382 aaKnown RBP11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 TMED3Q9Y3Q3 217 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 F5P12259 2224 aa11.92□□□□□ -0.5
PCDHGA3-201ENST00000253812 TMED7-TICAM2A0A0A6YYA0 188 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 GEMIN2O14893 280 aaKnown RBP11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 PPM1DO15297 605 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 PTP4A3O75365 173 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 IGHA1P01876 353 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 ADH4P08319 380 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 ABOP16442 354 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 TCN2P20062 427 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 PLP1P60201 277 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 RPL27P61353 136 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms