RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ZNF736B4DX44 427 aaPredicted RBP13.9□□□□□ -0.18
LRFN1-201ENST00000248668 LDLRAD4O15165 306 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 H2BFSP57053 126 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 TAS2R19P59542 299 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 C1orf100Q5SVJ3 147 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 PLXDC2Q6UX71 529 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 SLC36A1Q7Z2H8 476 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 TIPARPQ7Z3E1 657 aaKnown RBP13.9□□□□□ -0.18
LRFN1-201ENST00000248668 DTX1Q86Y01 620 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 NKAIN3Q8N8D7 197 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 OR14L1PQ8NHC6 308 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 COQ8AQ8NI60 647 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 PAQR8Q8TEZ7 354 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 PNRC2Q9NPJ4 139 aaKnown RBP13.9□□□□□ -0.18
LRFN1-201ENST00000248668 MLXQ9UH92 298 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 LOXL2Q9Y4K0 774 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 RAB27BO00194 218 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF806P0C7X5 589 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 MLF1P58340 268 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 GLIPR1L1Q6UWM5 242 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF584Q8IVC4 421 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 BPIFB2Q8N4F0 458 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 SLC22A24Q8N4F4 322 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 NARS2Q96I59 477 aaKnown RBP13.9□□□□□ -0.18
LRFN1-201ENST00000248668 SLC17A5Q9NRA2 495 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 PADI1Q9ULC6 663 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 RHBDD3Q9Y3P4 386 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 DOCK10Q96BY6 2186 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 NBASA2RRP1 2371 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 TRBV23-1A0A0A0MS06 115 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 METTL21EPA6NDL7 271 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 PATE4P0C8F1 98 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 ZP3P21754 424 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 CFPP27918 469 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 ADH6P28332 368 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 DSCR4P56555 118 aaPredicted RBP13.89□□□□□ -0.19
LRFN1-201ENST00000248668 PGAM5Q96HS1 289 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 SLC6A7Q99884 636 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 TTLL8A6PVC2 850 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 TRA2AQ13595 282 aaKnown RBP eCLIP13.89□□□□□ -0.19
LRFN1-201ENST00000248668 DCAF12Q5T6F0 453 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 M1APQ8TC57 530 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 ROBO4Q8WZ75 1007 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 TMEM41AQ96HV5 264 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 NPTNQ9Y639 398 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 LOC400499M0QZD8 3231 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 FXYD6-FXYD2A0A087WZ82 144 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 LIN54Q6MZP7 749 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 SLC23A3Q6PIS1 610 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 PPP1R32Q7Z5V6 425 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 LYPD6Q86Y78 171 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 ADPRHL1Q8NDY3 354 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 OR9K2Q8NGE7 335 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 WBP1Q96G27 269 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 FXYD6Q9H0Q3 95 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 TCFL5Q9UL49 500 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 ZNF407Q9C0G0 2248 aa13.89□□□□□ -0.19
LRFN1-201ENST00000248668 LOC390937A0A1W2PQ73 354 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 ARPC5O15511 151 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 ZNF17P17021 662 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 ALKAL2Q6UX46 152 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 SEZ6L2Q6UXD5 910 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 OR10K1Q8NGX5 313 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 DOCK7Q96N67 2140 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 REG4Q9BYZ8 158 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 RAB22AQ9UL26 194 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 TMEM82A0PJX8 343 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 ZNHIT1O43257 154 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 H3F3AP84243 136 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 WIPI1Q5MNZ9 446 aaPredicted RBP13.88□□□□□ -0.19
LRFN1-201ENST00000248668 NAXEQ8NCW5 288 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 NANPQ8TBE9 248 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 CT55Q8WUE5 264 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 ULBP2Q9BZM5 246 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 EMC3Q9P0I2 261 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 MRPS28Q9Y2Q9 187 aaKnown RBP13.88□□□□□ -0.19
LRFN1-201ENST00000248668 SESN1Q9Y6P5 492 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 P04436 131 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 IL5P05113 134 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 CXCL2P19875 107 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 PEAR1Q5VY43 1037 aaPredicted RBP13.88□□□□□ -0.19
LRFN1-201ENST00000248668 OR5AS1Q8N127 324 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 OR2AK2Q8NG84 335 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 ALKBH3Q96Q83 286 aaPredicted RBP13.88□□□□□ -0.19
LRFN1-201ENST00000248668 PLEK2Q9NYT0 353 aa13.88□□□□□ -0.19
LRFN1-201ENST00000248668 FAM74A7A6NL05 159 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 PMS2P2O95744 297 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 FAHP16930 419 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 MSR1P21757 451 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 MPLP40238 635 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 CXADRP78310 365 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 HIST3H3Q16695 136 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 FAM74A3Q4VXF1 159 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 FOXRED1Q96CU9 486 aaPredicted RBP13.87□□□□□ -0.19
LRFN1-201ENST00000248668 ZC3H10Q96K80 434 aaKnown RBP13.87□□□□□ -0.19
LRFN1-201ENST00000248668 ELL3Q9HB65 397 aaPredicted RBP13.87□□□□□ -0.19
LRFN1-201ENST00000248668 SOCS1O15524 211 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 IGHV3-9P01782 118 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 CPN1P15169 458 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 NTF4P34130 210 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms