RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ABHD6Q9BV23 337 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 SLC16A7O60669 478 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 OPN1LWP04000 364 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 GSTP1P09211 210 aaKnown RBP11.62□□□□□ -0.55
VAMP4-201ENST00000236192 CRISP2P16562 243 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 RAE1P78406 368 aaKnown RBP11.62□□□□□ -0.55
VAMP4-201ENST00000236192 ZNF154Q13106 437 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 LMF2Q9BU23 707 aaKnown RBP11.62□□□□□ -0.55
VAMP4-201ENST00000236192 UBR2Q8IWV8 1755 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 CITO14578 2027 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 A0A1B0GWA3 101 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 DIRC3C9JPN6 131 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 GFYI3L273 518 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 HPRT1P00492 218 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 GLB1P16278 677 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 LBX1P52954 281 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 CLRN1P58418 232 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 FZD5Q13467 585 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 MSMO1Q15800 293 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 BCL2L2Q92843 193 aaPredicted RBP11.62□□□□□ -0.55
VAMP4-201ENST00000236192 SLC25A28Q96A46 364 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 FAM71F1Q96KD3 344 aaPredicted RBP11.62□□□□□ -0.55
VAMP4-201ENST00000236192 KIAA1456Q9P272 454 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 VSIG4Q9Y279 399 aa11.62□□□□□ -0.55
VAMP4-201ENST00000236192 SSSCA1O60232 199 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 WDR1O75083 606 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HOXD9P28356 352 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-201ENST00000236192 LMAN2Q12907 356 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 CLEC18BQ6UXF7 455 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 ZNF573Q86YE8 665 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 C17orf78Q8N4C9 275 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 LMX1AQ8TE12 382 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 ANKRD9Q96BM1 317 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-201ENST00000236192 NKX3-1Q99801 234 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-201ENST00000236192 LAMB2P55268 1798 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 SCN9AQ15858 1988 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 A0A087WWC5 75 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HIST1H2BKO60814 126 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HIST1H2BJP06899 126 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 MDKP21741 143 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HIST1H2BOP23527 126 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HIST1H2BBP33778 126 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 BLKP51451 505 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HIST1H2BDP58876 126 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 RPS23P62266 143 aaKnown RBP11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HIST1H2BCP62807 126 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HIST3H3Q16695 136 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HIST2H2BEQ16778 126 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 PHLDA2Q53GA4 152 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-201ENST00000236192 ZNF880Q6PDB4 577 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HIST1H2BHQ93079 126 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 FGGYQ96C11 551 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HIST1H2BNQ99877 126 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HIST1H2BMQ99879 126 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 MS4A8Q9BY19 250 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 ZNF331Q9NQX6 463 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HAO2Q9NYQ3 351 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 TBX21Q9UL17 535 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 PADI3Q9ULW8 664 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 SDCBPO00560 298 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-201ENST00000236192 TNFRSF10CO14798 259 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 OR7C2O60412 319 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HSPB1P04792 205 aaKnown RBP11.61□□□□□ -0.55
VAMP4-201ENST00000236192 GAGE1Q13065 139 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 FAM78BQ5VT40 261 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 BRICD5Q6PL45 260 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HEPN1Q6WQI6 88 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 ARL14EPQ8N8R7 260 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-201ENST00000236192 EMC9Q9Y3B6 208 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 TRAV14DV4A0A0A6YYC5 116 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 SHISA3A0PJX4 238 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 ITGB1BP1O14713 200 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 MBPP02686 304 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-201ENST00000236192 P2RY1P47900 373 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 TNFSF10P50591 281 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 TDGF1P3P51864 188 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 PSRC1Q6PGN9 363 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-201ENST00000236192 WDR5BQ86VZ2 330 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 Q96M85 177 aa11.61□□□□□ -0.55
VAMP4-201ENST00000236192 HHLA1C9JL84 531 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 ALOX12BO75342 701 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 CYB561D1Q8N8Q1 229 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 IGLV3-10A0A075B6K4 115 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 RAB29O14966 203 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 LDLRAD4O15165 306 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 DDAH2O95865 285 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 F13BP05160 661 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 THBS2P35442 1172 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 FER1L6Q2WGJ9 1857 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 NXT1Q9UKK6 140 aaKnown RBP11.6□□□□□ -0.55
VAMP4-201ENST00000236192 TIMM10BQ9Y5J6 103 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 H7C1C5 153 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 P2RY10O00398 339 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 HIST1H1TP22492 207 aaPredicted RBP11.6□□□□□ -0.55
VAMP4-201ENST00000236192 CLDN2P57739 230 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 C2orf68Q2NKX9 166 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 ZNF343Q6P1L6 599 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 YAF2Q8IY57 180 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 DOK4Q8TEW6 326 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms