RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 NBPF12Q5TAG4 269 aaPredicted RBP11.6□□□□□ -0.55
MSH2-201ENST00000233146 CHST9Q7L1S5 443 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 GVQW1Q8N7I0 195 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 OR2AP1Q8NGE2 309 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 COL4A3Q01955 1670 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 A0A1B0GTH9 108 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 MED19A0JLT2 244 aaPredicted RBP11.6□□□□□ -0.55
MSH2-201ENST00000233146 A6NIZ1 184 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 K7N7A8 449 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 ZNF217O75362 1048 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 AGR2O95994 175 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 CEBPGP53567 150 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 HLA-DRB3P79483 266 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 CYB561D1Q8N8Q1 229 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 SLC26A10Q8NG04 563 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 LYSMD1Q96S90 227 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 GPR35Q9HC97 309 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 MRM2Q9UI43 246 aaKnown RBP11.6□□□□□ -0.55
MSH2-201ENST00000233146 WDR45Q9Y484 360 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 TICRRQ7Z2Z1 1910 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 ARL5CA6NH57 179 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 CNMDO75829 334 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 TNFSF13O75888 250 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 SUPT4H1P63272 117 aaKnown RBP11.6□□□□□ -0.55
MSH2-201ENST00000233146 UBE2V1Q13404 147 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 SLC22A6Q4U2R8 563 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 ZNF550Q7Z398 422 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 TMEM156Q8N614 296 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 NPEPL1Q8NDH3 523 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 CORO2AQ92828 525 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 RSPRY1Q96DX4 576 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 C5orf66Q9H5L9 145 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 MEMO1Q9Y316 297 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 ZNF264O43296 627 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 P2RY1P47900 373 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 C16orf59Q7L2K0 433 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 TRAPPC6BQ86SZ2 158 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 LILRA3Q8N6C8 439 aaPredicted RBP11.59□□□□□ -0.55
MSH2-201ENST00000233146 OR5T1Q8NG75 326 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 STT3BQ8TCJ2 826 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 BOD1Q96IK1 185 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 SH3BGRL3Q9H299 93 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 WFDC1Q9HC57 220 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 ADAP2Q9NPF8 381 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 SLC25A13Q9UJS0 675 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 GPR132Q9UNW8 380 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 DEDDO75618 318 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 OR2J2O76002 312 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 ABHD16AO95870 558 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 OPN1MWP04001 364 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 OPN1MW2P0DN77 364 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 OPN1MW3P0DN78 364 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 AK4P27144 223 aaPredicted RBP11.59□□□□□ -0.55
MSH2-201ENST00000233146 S100A7P31151 101 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 BMI1P35226 326 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 OR1Q1Q15612 314 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 MORN1Q5T089 497 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 SPSB3Q6PJ21 355 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 FAM213BQ8TBF2 198 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 NUDT11Q96G61 164 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 PRRX2Q99811 253 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 RNF150Q9ULK6 438 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 MED31Q9Y3C7 131 aa11.59□□□□□ -0.55
MSH2-201ENST00000233146 BORCS7-ASMTA0A0B4J1R7 106 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 WIPF3A6NGB9 483 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 H3BSH0 61 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 K7ERQ8 282 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 HSPB1P04792 205 aaKnown RBP11.58□□□□□ -0.55
MSH2-201ENST00000233146 CEACAM1P13688 526 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 DCAF7P61962 342 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 TAF10Q12962 218 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 ICAM4Q14773 271 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 FAM78AQ5JUQ0 283 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 C1orf189Q5VU69 101 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 FAM220AQ7Z4H9 259 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 TMCO2Q7Z6W1 182 aaPredicted RBP11.58□□□□□ -0.55
MSH2-201ENST00000233146 EXD3Q8N9H8 876 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 OR56A1Q8NGH5 318 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 CABLES2Q9BTV7 478 aa11.58□□□□□ -0.55
MSH2-201ENST00000233146 MKI67P46013 3256 aaKnown RBP11.58□□□□□ -0.56
MSH2-201ENST00000233146 DNAH12Q6ZR08 3092 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 A0A1B0GU03 582 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.58□□□□□ -0.56
MSH2-201ENST00000233146 A0A1B0GVT2 93 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 TOMM40O96008 361 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 IFNA6P05013 189 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 CKMP06732 381 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 MAPK8P45983 427 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 CLDN2P57739 230 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 ZNF676Q8N7Q3 588 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 OR6K6Q8NGW6 343 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 TBX15Q96SF7 602 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 TRIM2Q9C040 744 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 HSF4Q9ULV5 492 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 IFNL4K9M1U5 179 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 ZNF260Q3ZCT1 412 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 TPRG1Q6ZUI0 275 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 LHFPL4Q7Z7J7 247 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 RCBTB1Q8NDN9 531 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 CDS1Q92903 461 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms