RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 DEFB119Q8N690 84 aa8.39□□□□□ -1.07
HLA-DOA-201ENST00000229829 TMEM104Q8NE00 496 aa8.39□□□□□ -1.07
HLA-DOA-201ENST00000229829 MFSD8Q8NHS3 518 aa8.39□□□□□ -1.07
HLA-DOA-201ENST00000229829 KIRREL1Q96J84 757 aa8.39□□□□□ -1.07
HLA-DOA-201ENST00000229829 TMEM68Q96MH6 324 aa8.39□□□□□ -1.07
HLA-DOA-201ENST00000229829 CDCA3Q99618 268 aaPredicted RBP8.39□□□□□ -1.07
HLA-DOA-201ENST00000229829 LANCL2Q9NS86 450 aa8.39□□□□□ -1.07
HLA-DOA-201ENST00000229829 CA14Q9ULX7 337 aa8.39□□□□□ -1.07
HLA-DOA-201ENST00000229829 MED12Q93074 2177 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 PRSS37A4D1T9 235 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 PRAMEF26H0Y7S4 382 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 OR6A2O95222 327 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 IL11P20809 199 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 ACKR3P25106 362 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 GABRA4P48169 554 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 TAS2R60P59551 318 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 BIKQ13323 160 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 Q6ZRG5 221 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 C15orf54Q8N8G6 183 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 RLN3Q8WXF3 142 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 C8orf44Q96CB5 159 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 CMKLR1Q99788 373 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 ABHD6Q9BV23 337 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 METTL8Q9H825 291 aaKnown RBP8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZDHHC8Q9ULC8 765 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 DHDHQ9UQ10 334 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 SSUH2Q9Y2M2 353 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 A6NJY4 79 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 C9JQL5 133 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF25P17030 456 aaPredicted RBP8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 HTR2CP28335 458 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 GSK3AP49840 483 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 RIPPLY1Q0D2K3 151 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 SLC22A6Q4U2R8 563 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 TEX30Q5JUR7 227 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 RNF128Q8TEB7 428 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 ADIPOR1Q96A54 375 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 SLC25A44Q96H78 314 aaPredicted RBP8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 MMP26Q9NRE1 261 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 CLEC1BQ9P126 229 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 LRP12Q9Y561 859 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 FRYLO94915 3013 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 WIPF3A6NGB9 483 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF736B4DX44 427 aaPredicted RBP8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 EIF4E2O60573 245 aaKnown RBP8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 IFNA6P05013 189 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 JMJD7P0C870 316 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 MDKP21741 143 aaPredicted RBP8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 SERPINF1P36955 418 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 RPP30P78346 268 aaKnown RBP8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 ATPAF1Q5TC12 328 aaPredicted RBP8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 RTN4RL2Q86UN3 420 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 JAGN1Q8N5M9 183 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 CMBLQ96DG6 245 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 TCTN2Q96GX1 697 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 CYYR1Q96J86 154 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 SLC41A2Q96JW4 573 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 NUDT9Q9BW91 350 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 MTIF3Q9H2K0 278 aaKnown RBP8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 COA3Q9Y2R0 106 aaPredicted RBP8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 EMC9Q9Y3B6 208 aa8.38□□□□□ -1.07
HLA-DOA-201ENST00000229829 IGLV1-36A0A0B4J1U3 117 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 PPP1R2P9O14990 202 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 PMS2P2O95744 297 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF735P0CB33 412 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 SCAND1P57086 179 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 RPL27P61353 136 aaKnown RBP8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 NKX6-1P78426 367 aaPredicted RBP8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 FMODQ06828 376 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 PPP1R1AQ13522 171 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 SHHQ15465 462 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 LINC00346Q8IVM7 164 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 OR13C8Q8NGS7 320 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 GPR119Q8TDV5 335 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 MITD1Q8WV92 249 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 FAM46BQ96A09 425 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 CCNL2Q96S94 520 aaPredicted RBP8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 NKX2-4Q9H2Z4 354 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 OPA3Q9H6K4 179 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 MSRAQ9UJ68 235 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 KLK13Q9UKR3 277 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 CARHSP1Q9Y2V2 147 aaKnown RBP8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 C2orf72A6NCS6 295 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 METTL12A8MUP2 240 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF727A8MUV8 499 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 OR2C1O95371 312 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 DDAH2O95865 285 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 OR8U9P0C7N5 309 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 LPAR6P43657 344 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 CAPZBP47756 277 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 AFF3P51826 1226 aaKnown RBP8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 SMAD4Q13485 552 aaKnown RBP8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 MEF2DQ14814 521 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 VWA2Q5GFL6 755 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF385CQ66K41 422 aaPredicted RBP8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 SLC18B1Q6NT16 456 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 C16orf47Q6ZP98 133 aaPredicted RBP8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 Q6ZS52 159 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 GVQW1Q8N7I0 195 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 OR4D6Q8NGJ1 314 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms