RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CTXN2P0C2S0 81 aa12.46□□□□□ -0.42
HCFC2-201ENST00000229330 PMS2P11Q13670 270 aa12.46□□□□□ -0.42
HCFC2-201ENST00000229330 DEFB133Q30KQ1 61 aa12.46□□□□□ -0.42
HCFC2-201ENST00000229330 OTPQ5XKR4 325 aa12.46□□□□□ -0.42
HCFC2-201ENST00000229330 RGS7BPQ6MZT1 257 aaPredicted RBP12.46□□□□□ -0.42
HCFC2-201ENST00000229330 OR4A16Q8NH70 328 aa12.46□□□□□ -0.42
HCFC2-201ENST00000229330 CHST11Q9NPF2 352 aa12.46□□□□□ -0.42
HCFC2-201ENST00000229330 FIGNL2A6NMB9 653 aa12.46□□□□□ -0.42
HCFC2-201ENST00000229330 PTGER4P35408 488 aa12.46□□□□□ -0.42
HCFC2-201ENST00000229330 PRTGQ2VWP7 1150 aa12.46□□□□□ -0.42
HCFC2-201ENST00000229330 OR51B6Q9H340 312 aa12.46□□□□□ -0.42
HCFC2-201ENST00000229330 SULT1A1P50225 295 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 MRPS21P82921 87 aaKnown RBP12.45□□□□□ -0.42
HCFC2-201ENST00000229330 HABP2Q14520 560 aaPredicted RBP12.45□□□□□ -0.42
HCFC2-201ENST00000229330 KIAA0895LQ68EN5 471 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 VN1R2Q8NFZ6 395 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 NTNG2Q96CW9 530 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 ADAT1Q9BUB4 502 aaKnown RBP12.45□□□□□ -0.42
HCFC2-201ENST00000229330 TRAPPC1Q9Y5R8 145 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 SSC5DA1L4H1 1573 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 MFNGO00587 321 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 HSF1Q00613 529 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 FAHD2BQ6P2I3 314 aaPredicted RBP12.45□□□□□ -0.42
HCFC2-201ENST00000229330 ZNF574Q6ZN55 896 aaPredicted RBP12.45□□□□□ -0.42
HCFC2-201ENST00000229330 PPP1R3BQ86XI6 285 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 OTOSQ8NHW6 89 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 FAHD2AQ96GK7 314 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 B9D1Q9UPM9 204 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 UBR3Q6ZT12 1888 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 COL4A1P02462 1669 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 IDSB3KWA1 339 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 CRHP06850 196 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 MS4A10Q96PG2 267 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 OGG1O15527 345 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 ZNF25P17030 456 aaPredicted RBP12.45□□□□□ -0.42
HCFC2-201ENST00000229330 DTYMKP23919 212 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 GUCA2BQ16661 112 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 TMEM183BQ1AE95 376 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 WDR38Q5JTN6 314 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 UBL7Q96S82 380 aaPredicted RBP12.45□□□□□ -0.42
HCFC2-201ENST00000229330 EMC6Q9BV81 110 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 OR51M1Q9H341 326 aa12.45□□□□□ -0.42
HCFC2-201ENST00000229330 ZNF275Q9NSD4 429 aaPredicted RBP12.45□□□□□ -0.42
HCFC2-201ENST00000229330 TMEM184BQ9Y519 407 aaPredicted RBP12.45□□□□□ -0.42
HCFC2-201ENST00000229330 ZFAND5O76080 213 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 CD200P41217 278 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 TNFRSF4P43489 277 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 SLC25A1P53007 311 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 DPTQ07507 201 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 ZNF345Q14585 488 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 TMEM240Q5SV17 173 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 OR10J5Q8NHC4 309 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 REEP6Q96HR9 211 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 GPR87Q9BY21 358 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 NMES1Q9C002 83 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 SHARPINQ9H0F6 387 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 TXNIPQ9H3M7 391 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 TBX21Q9UL17 535 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 OR2B11Q5JQS5 317 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 PUSL1Q8N0Z8 303 aaKnown RBP12.44□□□□□ -0.42
HCFC2-201ENST00000229330 NINQ8N4C6 2090 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 SERPINE3A8MV23 424 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 AKR7A3O95154 331 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 MPGP29372 298 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 PPP1CBP62140 327 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 DHODHQ02127 395 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 LIPHQ8WWY8 451 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 HEYLQ9NQ87 328 aaPredicted RBP12.44□□□□□ -0.42
HCFC2-201ENST00000229330 RPH3ALQ9UNE2 315 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 OR8U8P0C7N1 319 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 GALR1P47211 349 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.44□□□□□ -0.42
HCFC2-201ENST00000229330 Q7L0L9 218 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 BHLHA9Q7RTU4 235 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 CATSPERDQ86XM0 798 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 MORN4Q8NDC4 146 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 C4orf45Q96LM5 186 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 MTCH1Q9NZJ7 389 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 SRPK3Q9UPE1 567 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 COL24A1Q17RW2 1714 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 A0A0B4J2E0 115 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 A0A1B0GX12 115 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 CST7O76096 145 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 PTBP3O95758 552 aaKnown RBP12.44□□□□□ -0.42
HCFC2-201ENST00000229330 CXCL10P02778 98 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 HOXD4P09016 255 aaPredicted RBP12.44□□□□□ -0.42
HCFC2-201ENST00000229330 HLA-DRB3P79483 266 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 SLC24A4Q8NFF2 622 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 SLC52A3Q9NQ40 469 aa12.44□□□□□ -0.42
HCFC2-201ENST00000229330 M0QZK8 103 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 GGCTO75223 188 aaKnown RBP12.43□□□□□ -0.42
HCFC2-201ENST00000229330 SCGB2A1O75556 95 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 F12P00748 615 aaPredicted RBP12.43□□□□□ -0.42
HCFC2-201ENST00000229330 ABOP16442 354 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 COX5AP20674 150 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 HNF1AP20823 631 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 CARD18P57730 90 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 ZNF596Q8TC21 504 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 TECTBQ96PL2 329 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 MRPS18AQ9NVS2 196 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms