RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CHST4Q8NCG5 386 aa22.02■■□□□ 1.12
RUNDC3A-201ENST00000225441 SLC22A8Q8TCC7 542 aa22.02■■□□□ 1.12
RUNDC3A-201ENST00000225441 LINC00052Q96N35 136 aa22.02■■□□□ 1.12
RUNDC3A-201ENST00000225441 VDAC3Q9Y277 283 aa22.02■■□□□ 1.12
RUNDC3A-201ENST00000225441 C9orf170A2RU37 121 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 ZNF354AO60765 605 aaPredicted RBP22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 PGA4P0DJD7 388 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 PGA3P0DJD8 388 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 COX6A1P12074 109 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 CCL1P22362 96 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 PNLIPRP3Q17RR3 467 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 SLC25A47Q6Q0C1 308 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 OR10S1Q8NGN2 331 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 NPAS1Q99742 590 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 WIF1Q9Y5W5 379 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 WIPF3A6NGB9 483 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 STMND1H3BQB6 276 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 GFRA3O60609 400 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 ZNF93P35789 620 aaPredicted RBP22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 EIF1P41567 113 aaKnown RBP22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 TMPRSS7Q7RTY8 843 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 WDFY1Q8IWB7 410 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 PXT1Q8NFP0 134 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 KCNG3Q8TAE7 436 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 OXGR1Q96P68 337 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 PDCD10Q9BUL8 212 aa22.01■■□□□ 1.11
RUNDC3A-201ENST00000225441 CACNA1CQ13936 2221 aa22■■□□□ 1.11
RUNDC3A-201ENST00000225441 C21orf140B9A014 251 aa22■■□□□ 1.11
RUNDC3A-201ENST00000225441 EFNA2O43921 213 aa22■■□□□ 1.11
RUNDC3A-201ENST00000225441 DUS4LO95620 317 aaKnown RBP22■■□□□ 1.11
RUNDC3A-201ENST00000225441 IFNA6P05013 189 aa22■■□□□ 1.11
RUNDC3A-201ENST00000225441 CASRP41180 1078 aa22■■□□□ 1.11
RUNDC3A-201ENST00000225441 CBX5P45973 191 aa22■■□□□ 1.11
RUNDC3A-201ENST00000225441 JMJD6Q6NYC1 403 aaPredicted RBP22■■□□□ 1.11
RUNDC3A-201ENST00000225441 LHFPL5Q8TAF8 219 aa22■■□□□ 1.11
RUNDC3A-201ENST00000225441 POC1BQ8TC44 478 aa22■■□□□ 1.11
RUNDC3A-201ENST00000225441 NKX3-1Q99801 234 aaPredicted RBP22■■□□□ 1.11
RUNDC3A-201ENST00000225441 ZMAT3Q9HA38 289 aaKnown RBP22■■□□□ 1.11
RUNDC3A-201ENST00000225441 DLL3Q9NYJ7 618 aa22■■□□□ 1.11
RUNDC3A-201ENST00000225441 HDGFL3Q9Y3E1 203 aa22■■□□□ 1.11
RUNDC3A-201ENST00000225441 LHFPL6Q9Y693 200 aa22■■□□□ 1.11
RUNDC3A-201ENST00000225441 TERTO14746 1132 aaKnown RBP21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 FCER2P06734 321 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 DLSTP36957 453 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 PTGDSP41222 190 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 P2RY4P51582 365 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 CYCSP99999 105 aaKnown RBP21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 TUSC1Q2TAM9 212 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 C16orf47Q6ZP98 133 aaPredicted RBP21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 MOB3CQ70IA8 216 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 PPP1R32Q7Z5V6 425 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 IMMP1LQ96LU5 166 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 SCGB3A2Q96PL1 93 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 GAL3ST1Q99999 423 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 GPR87Q9BY21 358 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 FBXL2Q9UKC9 423 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 ALPK2Q86TB3 2170 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 FAM186AA6NE01 2351 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 LOC101059948A0A1B0GTJ6 334 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 C2orf72A6NCS6 295 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 CEACAM18A8MTB9 384 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 CTSSP25774 331 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 GRB2P62993 217 aaKnown RBP21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 IL13RA1P78552 427 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 FOXK1P85037 733 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 SSPNQ14714 243 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 TAF13Q15543 124 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 VAX1Q5SQQ9 334 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 AWAT2Q6E213 333 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 ANGPTL5Q86XS5 388 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 ARRDC1Q8N5I2 433 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 OR4S1Q8NGB4 309 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 NKD1Q969G9 470 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 FAM117AQ9C073 453 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 METTL7AQ9H8H3 244 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 MYOTQ9UBF9 498 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 GHRLQ9UBU3 117 aa21.99■■□□□ 1.11
RUNDC3A-201ENST00000225441 A0A0B4J2A0 478 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 CDRT15L2A8MXV6 281 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 H3BML4 177 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 TLX3O43711 291 aaPredicted RBP21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 TRAF3IP2O43734 574 aaPredicted RBP21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 CD82P27701 267 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 PPP1R1AQ13522 171 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 EXT1Q16394 746 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 HIST3H3Q16695 136 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 DOK3Q7L591 496 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 NAA40Q86UY6 237 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 CD163Q86VB7 1156 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 STPG2Q8N412 459 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 CST11Q9H112 138 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 SHPKQ9UHJ6 478 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 POLR1DQ9Y2S0 133 aa21.98■■□□□ 1.11
RUNDC3A-201ENST00000225441 KNTC1P50748 2209 aa21.97■■□□□ 1.11
RUNDC3A-201ENST00000225441 EFSO43281 561 aa21.97■■□□□ 1.11
RUNDC3A-201ENST00000225441 SPDEFO95238 335 aa21.97■■□□□ 1.11
RUNDC3A-201ENST00000225441 RLN2P04090 185 aa21.97■■□□□ 1.11
RUNDC3A-201ENST00000225441 OTX2P32243 289 aa21.97■■□□□ 1.11
RUNDC3A-201ENST00000225441 NKPD1Q17RQ9 610 aa21.97■■□□□ 1.11
RUNDC3A-201ENST00000225441 SMUG1Q53HV7 270 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms